Rahnella aquatilis HX2: Q7S_21080
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Entry
Q7S_21080 CDS
T01850
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
raa
Rahnella aquatilis HX2
Pathway
raa00071
Fatty acid degradation
raa00280
Valine, leucine and isoleucine degradation
raa00310
Lysine degradation
raa00362
Benzoate degradation
raa00380
Tryptophan metabolism
raa00410
beta-Alanine metabolism
raa00640
Propanoate metabolism
raa00650
Butanoate metabolism
raa00907
Pinene, camphor and geraniol degradation
raa00930
Caprolactam degradation
raa01100
Metabolic pathways
raa01110
Biosynthesis of secondary metabolites
raa01120
Microbial metabolism in diverse environments
raa01200
Carbon metabolism
raa01212
Fatty acid metabolism
Module
raa_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Q7S_21080 (fadB)
00650 Butanoate metabolism
Q7S_21080 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
Q7S_21080 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Q7S_21080 (fadB)
00310 Lysine degradation
Q7S_21080 (fadB)
00380 Tryptophan metabolism
Q7S_21080 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Q7S_21080 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Q7S_21080 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Q7S_21080 (fadB)
00930 Caprolactam degradation
Q7S_21080 (fadB)
Enzymes [BR:
raa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Q7S_21080 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Q7S_21080 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Q7S_21080 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Q7S_21080 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
B12-binding_2
Motif
Other DBs
NCBI-ProteinID:
AFE60425
LinkDB
All DBs
Position
4627167..4629359
Genome browser
AA seq
730 aa
AA seq
DB search
MLYQGETLHLHWLDGGIAELVFDAPGSVNKLDTQTVASLGEAIAVLEKQSDLKGLLLSSA
KPAFIVGADITEFLSLFNAPAEKLHEWLDFANSIFNRLEDLPVPTLSAISGYALGGGCEC
VLATDFRISTADARIGLPETSLGIMPGFGGSVRLPRLIGTDSALEIIAAGKNISGKEALK
VGLVDAVVEADKLRDAGISMLRNAVDGKLEWHNRRDPKRLPLKLSQIEAAMSFSVAKSMV
MQNAGKHYPAPMSAVKTIEAAARLGRDEALQLETASFVPLAQSKEARALVSIFLNDQFVK
SKAKKLAQDSEKPKQAAVLGAGIMGGGIAYQSALKGVPVVMKDINDQSLTLGMNEAAKLL
NKQLERGKLDGLKMAKVLSTIHPTLDYSGIERASVVVEAVVENPKVKAAVLAEAESLLGT
DTVLASNTSTIPIDLLASSLKRPENFCGMHFFNPVHRMPLVEIVRGEKTSDKTISRIVSY
ALAMGKTPIVVNDCPGFFVNRVLFPYFSGFSLLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMARDYRDAVDVLFDNRRFGQKNQLGFYRYSEDSKGKP
RKEVDEQAISLLADNLKPAHTDFSPQDIIARMMIPMINEVVRCFEEGIIASPAEADMALV
YGIGFPPFHGGPFRYLDTLGTTEYLKMTEQYAHLGPMYQAPEGLRAKAQTNESYYPVAAP
LENFSTGNQA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacactacacctgcactggctcgacggcggtatcgcggagctg
gtgtttgatgccccaggctcggttaacaagctcgacacccaaactgtcgccagcctgggc
gaagccattgcagtacttgaaaaacagtctgacctgaaaggtctgctgctcagttcggcc
aaaccagcgtttatcgtgggcgcggatatcaccgaatttttatccctgttcaacgcgcca
gccgaaaaactgcatgaatggctggatttcgccaacagcatttttaaccggctggaagac
ctgccggtaccgacactttctgccatcagcggttatgcgctgggcggcggttgcgaatgc
gtgctggcgacagattttcgtatcagcactgccgatgcccggattggcctgccggaaacc
agtttagggattatgccgggcttcggcggttccgtacgtctgccacgtctgattgggacc
gatagtgcgctggaaattatcgccgccggtaaaaatatcagcggaaaagaggccctgaaa
gtcgggctggtcgatgcagtggttgaagccgataaactgcgcgacgctggcatcagcatg
ctgagaaacgccgttgacggcaaactggaatggcataaccgtcgtgatcctaaacgtctg
ccgttgaaactgagccagattgaagcggcgatgagcttcagcgtcgccaaaagtatggtc
atgcaaaatgccggtaaacactatccggcgcccatgagcgcggtgaaaaccatagaagcc
gcggcccgtctgggtcgtgatgaagcgttgcagctggaaaccgccagctttgtgccgctc
gcacaatcaaaagaagcccgcgcactggtcagtattttccttaacgatcagtttgtgaaa
agcaaagccaaaaaactggcgcaagacagcgaaaaaccaaaacaggccgccgtattgggc
gcgggcattatgggcggcgggatcgcctaccagtctgcgctgaaaggcgtgccggttgtg
atgaaagatatcaacgaccagtccctgacgctcggcatgaacgaggctgccaagttgctg
aacaagcaactggagcgcggtaaactcgacggtctgaaaatggctaaagtgctgtcgacc
attcatccgacgctggattacagcggcatcgaacgtgcctctgtggtcgttgaagccgtg
gtcgagaatcctaaagtgaaggccgcggtgctggcggaagcggaatctctgctcggcacc
gataccgttctggcctcgaatacctcgaccattcctatcgatctgttggcgtcttcgctc
aaacgcccggaaaacttctgtggtatgcacttcttcaacccggtgcatcgtatgccgctg
gtcgaaatcgtgcgtggtgagaaaacctcagacaaaacgatttcgcgcatcgtttcttac
gcactggcgatgggtaaaacgcctatcgtggtcaacgactgcccgggattcttcgtcaac
cgcgtactgttcccgtatttctccggtttcagtctgttactgcgtgatggcgctgatttc
cgccagatcgacaaagtgatggaaaaacagttcggctggccgatgggtccggcttatctg
ctggatgtggtcggcatcgacaccgcgcatcacgcccaggccgtgatggccgccggtttc
cctgagcgcatggcacgggattaccgtgacgctgttgatgtgctgtttgataaccgtcgt
tttgggcagaaaaatcaactcggtttctaccgttacagcgaagacagcaaaggcaagccg
cgcaaggaagttgacgaacaggcgatcagtctgctggccgacaacctgaaaccagcacac
actgacttctcaccgcaggacatcatcgcccgcatgatgattccgatgattaacgaagtg
gtgcgctgctttgaggaaggcattattgccagcccggccgaagccgacatggcgctggtt
tacggcatcggattcccccctttccacggcggcccgttccgttatctcgataccctcggt
accactgagtatctgaaaatgactgaacagtatgcacatctggggccgatgtatcaggca
ccggaagggctacgcgccaaagcgcaaaccaatgaaagttactatccggttgccgctccg
ctggaaaacttcagcaccggtaatcaggcataa
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