Rickettsia africae: RAF_ORF0472
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Entry
RAF_ORF0472 CDS
T00979
Symbol
lysS
Name
(GenBank) Lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
raf
Rickettsia africae
Pathway
raf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
raf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RAF_ORF0472 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
raf01007
]
RAF_ORF0472 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
raf03016
]
RAF_ORF0472 (lysS)
Enzymes [BR:
raf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RAF_ORF0472 (lysS)
Amino acid related enzymes [BR:
raf01007
]
Aminoacyl-tRNA synthetase
Class I (A)
RAF_ORF0472 (lysS)
Transfer RNA biogenesis [BR:
raf03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RAF_ORF0472 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
tRNA-synt_1c
LPD34
Caskin-tail
Motif
Other DBs
NCBI-ProteinID:
ACP53396
UniProt:
C3PN86
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All DBs
Position
497941..499509
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AA seq
522 aa
AA seq
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MSKIWEDAIKSNAWPFVEAKKILDSLNGQIPEKGYVLFETGYGPSGLPHIGTFGENARMV
MVQKAFEQLSDIPTKLICFSDDMDGLRKVPSNIPNPEMVAQYMDMPLTSIPDTFGECESY
GHYMNAKLRSFLDKFGFEYEFYSSTNCYKAGMFDEMLRMVLEKYDEIMELMLPTFREERK
ATYSPFMPICPKTGKVLQVPIEKWDAKAGTVTYKDKAGNYIEVPVTGGHCKLQWKPDFGM
RWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGEKISKSKGNSIS
IDDWLKYAPVESMALFMYQNPTRAKRLFFDVIPKNVDEYITFNQKYHLEEDRAKRFANPV
YHIHHGNVPKIETFGITYSLLLNLTSVCNPSDKSVLWGFISKYEPKATPNTNPYLDHLAE
FAIRYYNDFIKAHKSYLSPSEKHKVILQDILDMLSDIADQTEAEAIQKAIYDIGMKAGYE
NLRDYFKDLYQILLGQNEGPRLGTFIKLYGVQEMKKLVEGQL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatttgggaagatgctattaagtcaaacgcgtggccttttgttgaggctaag
aagatattagatagcttaaacggtcaaattcctgagaaggggtatgtattatttgaaacg
ggttatggtccttcaggtttacctcatatcggtacttttggtgaaaatgcccgtatggtg
atggtacagaaagcatttgagcaattatccgatattccgactaaactaatttgcttttcc
gatgatatggacgggcttcgtaaagtacctagcaatatcccaaatcctgaaatggtggca
cagtatatggatatgccgcttacttctatccctgatacattcggtgaatgtgaaagttat
gggcattatatgaatgcaaagcttcgctcattccttgataaattcggctttgagtatgaa
ttttatagcagtactaactgttataaagctggtatgtttgatgagatgctgagaatggtg
cttgagaaatatgacgagataatggagctaatgctaccgacttttagagaagagcgcaag
gctacctattcacctttcatgcctatatgtccgaaaacaggtaaggtactgcaagtacct
atagagaaatgggatgctaaagcaggcactgtaacgtataaagacaaagccggtaattat
atagaagtaccggtaacaggagggcattgcaaattacagtggaagccggattttggtatg
cgttgggctgcgcttaaagtcgattatgagatgtacggcaaagaccatttggcaaatgct
cgtctttattcggaaatttgccgaatcctaggaggaaagccgccggtgcagttatgttat
gagttattcttagatgaaaacggtgagaaaatatcaaaatcaaaaggtaatagtattagc
attgatgattggcttaaatatgctcctgttgaaagtatggcattatttatgtatcaaaat
ccgactagagctaagcgtttgttttttgatgtaattcctaaaaatgttgatgaatatatt
acttttaaccagaaatatcatttagaagaggacagggcaaagcgttttgcaaatcccgtt
tatcacatccatcacggaaatgtaccgaaaattgagacttttggaattacctattcgttg
cttttaaatcttacttctgtgtgtaatccttcggataaatcggtgctttggggatttatt
agcaaatatgagccaaaagcaactccaaatactaacccttatcttgaccatttagcagaa
tttgctataagatattataatgactttattaaagcacataaatcatatttatctccttct
gaaaagcataaggttattttgcaggatatattagatatgttatctgatatagctgatcaa
accgaagctgaagcaattcagaaagcaatatatgatataggaatgaaagcaggatatgaa
aatctgcgtgattacttcaaagatttatatcaaatattgcttggacagaatgaagggcca
agacttgggacttttataaagctttacggggtgcaggaaatgaaaaagctggttgaaggg
cagttgtag
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