Riemerella anatipestifer RA-CH-1: B739_0889
Help
Entry
B739_0889 CDS
T02331
Name
(GenBank) Biotin carboxylase
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
rag
Riemerella anatipestifer RA-CH-1
Pathway
rag00061
Fatty acid biosynthesis
rag00620
Pyruvate metabolism
rag00640
Propanoate metabolism
rag01100
Metabolic pathways
rag01110
Biosynthesis of secondary metabolites
rag01120
Microbial metabolism in diverse environments
rag01200
Carbon metabolism
rag01212
Fatty acid metabolism
Module
rag_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
B739_0889
00640 Propanoate metabolism
B739_0889
09103 Lipid metabolism
00061 Fatty acid biosynthesis
B739_0889
Enzymes [BR:
rag01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
B739_0889
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
B739_0889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_C
Biotin_carb_N
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_5
RimK
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
AFR35490
UniProt:
J9QYE7
LinkDB
All DBs
Position
958040..959326
Genome browser
AA seq
428 aa
AA seq
DB search
MGIKTVAVYSTADKDSLHVRFADEAVCIGPPTSKDSYLSIPNILAAAEITNADAIHPGYG
FLSENANFSRICQKNNIKFIGASPEQIEKMGDKATAKATMKAAGIPCVPGSDGLIGSYEE
AAKIAEKIGYPVMIKATAGGGGKGMRAVWKAEDLRDHWDSAVQEAVAAFGNGGMYMEKLI
EEPRHIEIQIAGDQYGKACHLSERDCSIQRRNQKLTEETPSPFMTEGLREKMGEAAVKAA
EYIGYEGVGTIEFLVDKHRNFYFMEMNTRIQVEHPITEQVIDYDLIREQILLAAGTPISG
VNHYPKLHSIECRINAEDPYQDFRPSPGKITSLNIPGGHGIRVDTHVYSGYTIPSNYDSM
IAKLITTAQTREEAIAKMKRALEEFYIEGVKTTVAFHRQLMDDPDFVAGNYTTKFMETFK
MNKDYENM
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggggataaaaactgttgcagtttattctacagcggataaagatagtctgcatgtaaga
tttgcagacgaagcggtttgtataggacctccaacgagtaaagactcttatttgagtata
cctaatatacttgctgcagccgagattaccaatgctgatgctatccacccaggatatggg
tttttgtcggaaaacgctaatttttctagaatttgtcagaaaaataatataaagttcata
ggagctagcccagaacaaatagaaaaaatgggggacaaggctactgctaaagcaactatg
aaggctgcggggataccttgtgtgccaggttctgatggtttgataggttcttatgaagag
gctgcaaaaattgcagaaaaaattggttatccagtgatgataaaagcaactgcaggaggt
ggaggaaagggtatgcgtgctgtttggaaagcggaggatcttagagatcactgggattct
gcggtgcaagaggctgttgctgctttcggtaatggcggtatgtatatggaaaaactcata
gaagagcctagacatattgaaatacagatagctggcgaccaatatggtaaggcttgccat
ctttctgaaagggattgttctatacaaaggagaaatcaaaaattaacagaggaaactcct
tctccttttatgactgaaggacttcgtgaaaaaatgggagaggccgcggtaaaggctgca
gaatatattggttatgaaggggtaggtacgatagagttcttagtagataagcacaggaat
ttctactttatggaaatgaacactcgtattcaagtagagcatcctattacagagcaggtt
atagattatgaccttattagagaacaaattcttctagcggcaggaacgcctatatctggt
gtaaatcattatcctaaactacactcaatagaatgtaggattaatgcggaagatccttat
caagattttagaccatctccgggaaaaattactagtcttaatattccgggaggacacggg
ataagagtagatactcatgtttactctggttataccataccatctaattatgattctatg
atagctaaactcattactacggctcaaactagagaagaagctattgctaaaatgaagagg
gctttagaagagttttatatagagggagttaaaactacggtagccttccataggcagttg
atggatgatccagactttgtagcaggtaattatactaccaagtttatggaaacctttaaa
atgaataaagattacgaaaatatgtaa
DBGET
integrated database retrieval system