Raoultella sp. X13: DSD31_19930
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Entry
DSD31_19930 CDS
T05540
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
rao
Raoultella sp. X13
Pathway
rao00730
Thiamine metabolism
rao01100
Metabolic pathways
rao01240
Biosynthesis of cofactors
rao04122
Sulfur relay system
Module
rao_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DSD31_19930
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DSD31_19930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rao03016
]
DSD31_19930
Enzymes [BR:
rao01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DSD31_19930
Transfer RNA biogenesis [BR:
rao03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DSD31_19930
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Diphthami_syn_2
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AXC31581
UniProt:
A0A808Y1X0
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All DBs
Position
complement(4192540..4193988)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKNYDETLAVVRHWDHIEVRAKDENQR
PVIRDALTRIPGIHHILEVEDVPFTSLHDIFEKTLPLWREALEGKTFCVRVKRRGKHEFT
SIEVERYVGGGLNQHIETARVKLTDPDITVNLEIENDRLLLVKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMIRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIIDLAREIGTEDFARTMPEYCGVISKSPTVKAVKAKI
EAEEENFDFSILDKVVAEANNVDIRDIAQQTQQDVVEVETVTGFSPNDVILDIRSVDEQD
EKPLKVEGVDVVSLPFYKLSTQFGNLDQSKTWLLWCERGVMSRLQALYLREQGFENVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatccgtgagattg
cgcttcattaagatcttaaccgggaacattcgtaacgttctcaaaaactatgatgagacg
cttgccgtcgttcgtcattgggatcatatcgaagttcgcgcgaaagacgaaaatcagcgt
ccggttattcgcgatgcgctgacccgaatcccgggtatccaccatattctggaagtcgaa
gacgtcccgtttacctcactgcacgatatttttgagaaaacgctgccgctgtggcgcgaa
gcgctggaaggcaagactttctgcgtgcgcgtaaaacgtcgcggcaagcatgagtttacc
tctatcgaagtggaacgctacgtcggcggtggcctgaaccagcatatcgaaacggcgcgc
gtgaagctgactgacccggacattacggtcaatctggaaattgaaaacgatcgtctgctg
ctggtaaaagggcgctacgaaggcatcggtggtttcccgatcggcacgcaggaagatgtg
ctgtcgctgatttccggcggcttcgactccggcgtctccagctacatgctgatgcgtcgc
ggctgtcgcgtgcactactgtttctttaaccttggcggcgccgcgcatgaaattggcgtt
cgtcaggtggcgcactacctgtggaaccgcttcggcagttcgcaccgcgttcgtttcgtg
gcgattaacttcgaaccggtcgtgggggagatcctcgaaaaagtcgacgatggtcagatg
ggcgtggtgctgaagcgcatgatgatccgcgcggcgtcgaaagtcgccgagcgctatggc
gtgcaggcgctggtgaccggcgaagcgctgggccaggtgtccagccagaccctgaccaac
ctgcgtctgattgataatgtctccgacaccctgattctgcgtccgctgatttcgcacgat
aaagagcacatcatcgacctggcccgtgaaatcggcaccgaagattttgcccgcaccatg
ccggaatattgcggtgtgatttcgaagagcccgaccgtgaaagcggtgaaggcgaagatt
gaagcagaagaagagaacttcgactttagcatcctcgataaagtggtggcggaagcgaat
aacgtggatattcgcgatatcgcccagcagactcagcaggacgtggtggaagttgaaacc
gtgaccggctttagcccgaacgacgtcattctggatattcgttccgtagacgaacaggat
gagaagccgctgaaggttgaaggcgttgacgttgtgtcattgccgttctacaagctgagc
acccagttcggcaatctcgaccagagcaaaacctggttgctgtggtgcgaacgcggcgtg
atgagccgtctgcaggcgctgtacctgcgtgagcagggctttgagaacgtgaaggtttac
cgcccgtaa
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