Rhodovastum atsumiense: RHOA_0561
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Entry
RHOA_0561 CDS
T08162
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00362
Benzoate degradation
rap01100
Metabolic pathways
rap01120
Microbial metabolism in diverse environments
rap01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RHOA_0561 (pcaB)
Enzymes [BR:
rap01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
RHOA_0561 (pcaB)
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Motif
Pfam:
Lyase_1
ADSL_C
DUF2568
Motif
Other DBs
NCBI-ProteinID:
CAH2599143
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All DBs
Position
RHOA:617868..619220
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AA seq
450 aa
AA seq
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MPTNPADSQVMGTLYGSDAMRAVFEETAFLQRMLDTEAALARVQAGLGLIPEDAAETITA
VATIENLDTAELAASTRQVGYPVVGLVKGLARAAGQAGAWTHWGATTQDIIDTAVVLQVR
EGLALIRAELIGTIRVLARLTQTHRRTVMAGRAHLQHALPITFGLKCAVWLQPLAAHVQR
LDQLRPRVELVQFGGAAGTLASLGPRGLAVMERLAAELGLHTAPAPWHVARDGLAEAVSF
LGLLCGSLGKIATDVTLLAQTEIGEVNEPYVAGRGGSSTMPQTRNPIASEYVLAAVRGVQ
ALVPLMQGAMLQDHERATGPWQAEALALPQAFVLTHGALQQAHALIEGLVVDPARMRRNL
EGSGGLIMAEAVMMGLAPELGREAAHHAVQHACDRALADGLTLVEALAQEKVIAARLDRA
AIERLTDPARYLGSSEAFIDRVLAAAHATL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccaaccccgccgacagccaggtgatgggcacgctctatggctccgatgccatg
cgggccgtgttcgaggagacggcttttctgcagcgcatgctcgataccgaggcagcgctc
gcgcgggtgcaggccgggctcggcctgatcccggaggatgcggcggaaaccatcaccgcc
gtcgccaccatcgaaaatctcgacaccgccgagctcgccgcgagcacccgccaggtcggc
tatccggtggtcgggctggtgaaggggctcgcgcgcgcggccgggcaggccggcgcctgg
acgcattggggcgccaccacgcaggacatcatcgacaccgccgtggtgctgcaggtgcgc
gagggcctggccctgatccgcgccgagctgatcggcaccatccgcgtgctggcgcggctc
acccagacgcatcgccgcacggtgatggccgggcgggcgcatctgcagcacgccctgccg
atcaccttcgggctgaaatgcgcggtctggctacagccgctcgccgcgcatgtgcagcgc
ctcgaccagctccgcccgcgcgtcgagctggtgcagttcggcggtgccgccggcacgctg
gcctcgctcggcccgcgcgggctcgcggtgatggaacggctcgcggccgagctcggcctg
cacaccgcgcccgcgccctggcatgtcgcgcgcgacggcctggccgaggccgtctccttc
ctgggcctgctgtgcggcagcctcggcaagatcgccaccgacgtgaccctgctggcgcag
accgaaatcggcgaggtcaacgagccctatgtcgccggccgcggcggttcctccaccatg
ccgcagacgcgcaacccgatcgcgagcgagtacgtgctcgccgccgtgcgcggcgtgcag
gcgctggtgccgctgatgcaaggcgccatgctgcaggatcacgagcgcgccaccggcccc
tggcaggccgaggcgctcgccctgccgcaggccttcgtgctgacgcatggcgcgctgcaa
caggcgcacgcgctcatcgaggggctggtggtggaccccgcgcgcatgcgccgcaatctc
gaaggctccggcgggctgatcatggccgaggcggtgatgatgggcctcgccccggaactc
ggccgcgaggcggcgcatcatgcggtgcagcatgcctgcgaccgggcgctggccgatggc
ctcacgctggtggaagcgctggcgcaggagaaagtcatcgccgcgcggctcgaccgggcc
gcgatcgagcggctgacggatccggcccgctacctcggcagcagcgaggccttcatcgac
cgggttctcgccgccgctcacgcaacgctttga
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