Rhodovastum atsumiense: RHOA_5634
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Entry
RHOA_5634 CDS
T08162
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RHOA_5634 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rap01007
]
RHOA_5634 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rap03016
]
RHOA_5634 (lysS)
Enzymes [BR:
rap01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RHOA_5634 (lysS)
Amino acid related enzymes [BR:
rap01007
]
Aminoacyl-tRNA synthetase
Class I (A)
RHOA_5634 (lysS)
Transfer RNA biogenesis [BR:
rap03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RHOA_5634 (lysS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
F420H2_quin_red
Motif
Other DBs
NCBI-ProteinID:
CAH2604427
LinkDB
All DBs
Position
RHOA:5787733..5789313
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AA seq
526 aa
AA seq
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MPDTQSSLPAVPKAWPFEEARKVAERLARTGKSSALFETGYGPSGLPHIGTFGEVARTSW
VRHAFTELTGLPSKLLAFSDDMDGLRKVPDNVPNREMLAQHLGKPLTRIPDPFGTHPSFG
AHNNARLRSFLDSFGFAYEFASSSEYYASGRFDAALLRVLERHDEILAVILPTLGAERRA
SYSPFLPIHPKTGIVMQVKVEKLDPAAGTIAWRDPDTEEWFETLVTGGAAKLQWKADWAM
RWHALGVDYEMSGKDLIDSVKLSGRICRILGSEPPTGFTYELFLDEQAQKISKSKGNGLS
VEEWLRYAPPESLGQFMFNQPQRAKRLYFDVIPRAVDEYLANAARAHEQEGVERAANPAW
HIHAGQVPQEAHSPLSFAMLLNLASVVNAETPDILWGFIRRYNPQATPEDMPFLARLVEY
ALAYYRDFVRPAKQFREPDATERAALQDLAEGLRALPADAPAEDIQTLLYDVGKRHPFPE
LRAWFGCLYQVLLGQQEGPRFGQFIALYGIPETITLIETALARTPA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgccagacacacaatcctctctcccggccgttccgaaggcgtggcccttcgaggaagcc
cgcaaggtcgccgaacggctcgcccggaccggcaagtcctcggcgctgttcgagaccggc
tacggtccctcgggcctgccgcatatcggcaccttcggcgaggtcgcccgcacctcctgg
gtgcggcatgccttcaccgagctgaccggcctcccttcgaagctgctcgccttcagcgac
gacatggacgggctgcgcaaagtgccggacaacgtcccgaaccgggagatgctggcccag
cacctgggcaagccgctgacccgcatccccgacccgttcggcacccatccgagcttcggc
gcgcacaacaacgcccgcctgcgttccttcctcgattccttcggcttcgcctacgaattc
gcgtcttcctcggaatattacgcctcgggccgcttcgacgcggcgctgctgcgggtgctg
gagcggcacgacgagatcctcgcggtgatcctgcccacgctgggggcggaacgacgtgcc
agctactccccgttcctgccgatccatccgaagaccggcatcgtcatgcaggtgaaggtg
gagaagctcgatccggcggccggcaccatcgcctggcgcgacccggacaccgaggagtgg
ttcgagaccctggtcaccggcggcgcggccaagctgcagtggaaggcggactgggcaatg
cgctggcatgcgctcggcgtcgattacgagatgtcgggcaaggacctgatcgacagcgtg
aagctgtccggccggatctgccgcatcctgggcagcgagccgccgacgggcttcacctac
gagctgttcctcgacgaacaggcgcagaagatcagcaagagcaagggcaacggcctgtcg
gtggaggaatggctgcgctacgccccccccgagagcctgggccagttcatgttcaaccag
ccgcagcgcgccaagcggctgtatttcgacgtgatcccccgcgcggtcgacgagtacctg
gccaatgccgcgcgcgcgcacgagcaggagggcgtggagcgcgccgccaacccggcctgg
cacatccatgccggccaggtgccgcaggaagcgcattcgccgctgtccttcgccatgctg
ctgaacctcgcgagcgtggtgaacgcggagacgccggacatcctgtggggcttcatccgc
cgctacaacccgcaggcgaccccggaggacatgccgttcctggcacggctggtggaatac
gcgctggcgtactaccgtgacttcgtccgcccggccaagcagttccgcgagccggatgcc
accgagcgggcggcgctgcaggatctcgccgaagggctgcgcgccctgcccgcggatgcc
ccggccgaggacatccagacgctgctctacgatgtcggcaagcgccatcccttcccggaa
ctgcgcgcctggttcggctgtctctatcaggtgctgctgggccagcaggaagggccgcgc
ttcggccagttcatcgcgctctatggcatccccgaaaccataaccctgatcgagaccgcg
ctcgctcggacgccggcctga
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