Rhodovastum atsumiense: RHOA_PD0021
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Entry
RHOA_PD0021 CDS
T08162
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00270
Cysteine and methionine metabolism
rap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RHOA_PD0021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rap03000
]
RHOA_PD0021
03032 DNA replication proteins [BR:
rap03032
]
RHOA_PD0021
03036 Chromosome and associated proteins [BR:
rap03036
]
RHOA_PD0021
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rap02048
]
RHOA_PD0021
Enzymes [BR:
rap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
RHOA_PD0021
Transcription factors [BR:
rap03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
RHOA_PD0021
DNA replication proteins [BR:
rap03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
RHOA_PD0021
Chromosome and associated proteins [BR:
rap03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
RHOA_PD0021
Prokaryotic defense system [BR:
rap02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
RHOA_PD0021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
CAH2606071
LinkDB
All DBs
Position
RHOApd:14381..15853
Genome browser
AA seq
490 aa
AA seq
DB search
MDALTKPEIDTAAQAKLARLARGEKPRVLDMFSGAGGISLGFQRAGFQIDGALELDELAA
CTHATNFHGGDPEQLKLHAKPRDMTKVEPEELVEELGLGSVDSAIDVLVGGPPCQAYARV
GRAKLREVAEHPQAFKVDPRGNLFLRYLAYVKALRPLAILMENVPDILNFGGHNIIEEMV
EALDVLGYDARYSLINSAFHGCPQMRDRVFLVAYRKELKVKPRFPKATHHMELPPGYAGT
RAVALRYVDILGGAGYVQADLGDESLPFPVTAEEAIGDLPPILGTSVKRGARRFSRATWV
PYREDVEPSDYASKMRNWKGFETDGGVIDHAIRYLPRDHLVFKEMRQGAEYPEAHATAVR
IARREAVRLGIREGTKAYQEHYKGIVPPYDVSKFPNRWWKLRPDYPVRTLMAHLGKDTYS
HIHWDGGQARTISVREAARLQGFPDAFRFCGTMNPAFRQIGNAVPPLMAAAIAKIMRSSL
ESAAKRLAGS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggatgccttgacgaaaccggagatcgataccgccgcgcaagcgaagctggcgcggctg
gcccgtggggaaaagccgcgggtgttggacatgttctccggagctggcgggatttccctg
ggcttccagagggcaggcttccagatcgacggcgcccttgagctggacgagctcgcggcc
tgcacccatgccaccaacttccacgggggcgatcctgagcagctgaagctgcacgcgaag
ccccgcgacatgacgaaggtcgagcctgaggaactggtcgaggagctcgggctgggctcg
gtggacagcgcgatagacgtcctggtcggcgggccgccatgccaggcttacgcgcgggtc
gggcgcgccaagcttagagaggtcgccgaacacccacaggcattcaaggtggacccgcgc
ggcaacctgtttctgcgctatttggcgtatgtgaaagccctgcgcccacttgccatactg
atggaaaatgtgcccgacattctgaattttggtgggcacaatatcatcgaagagatggtc
gaagcacttgatgtgcttggatatgatgcccgttactcgctaatcaacagcgcatttcat
ggctgcccacagatgcgcgaccgcgttttccttgtcgcctaccgcaaggaactcaaggtc
aagccacggtttcccaaggctacccaccacatggaattgccgcctggctatgctggtacc
cgggcagtagcgctgcgctatgtcgacattctcggcggcgccggatacgtccaggccgac
ctgggtgacgaaagcctgccgtttcctgtgaccgccgaagaggcgatcggcgacctgccg
ccaatccttggcacgtctgtgaagcgcggcgcacgccggttcagccgggccacctgggtc
ccctaccgggaagacgtcgagcccagcgattatgcgtcaaagatgcggaactggaagggc
ttcgagacggacggcggcgtgatcgaccacgccatccgctatcttccacgcgaccacttg
gttttcaaagagatgcggcagggtgccgagtatccggaggcacacgcgaccgccgtcaga
atcgcccgacgtgaagcggtgcgcctaggcatccgggagggcaccaaggcataccaggaa
cactacaaagggatcgtccccccttacgacgtcagtaagttccccaaccgttggtggaaa
ttgcggccagactacccagtcagaacgttgatggcccatctcggcaaggacacctacagc
catatccattgggacggcgggcaagccaggacgatctccgtgcgcgaggcggcccgcttg
cagggcttcccggacgccttccggttctgcggtaccatgaacccggcattccggcagatc
ggcaacgcggttccgccgctgatggcggctgccattgccaagatcatgcgctcctctttg
gaatcggcagcgaagaggttggcgggcagctga
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