Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_0583
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Entry
Rahaq2_0583 CDS
T01770
Name
(GenBank) PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rahaq2_0583
Enzymes [BR:
raq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Rahaq2_0583
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_9
PAS_4
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AEX50510
UniProt:
H2ITQ8
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All DBs
Position
complement(608579..610597)
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AA seq
672 aa
AA seq
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MVDSQDASLLYLHFGTPRPYWRLSSDSNALELSAEKGVVNIAIPLTQWQAGKIKQLTGIT
SSFALDITLFGSPVRLYLVGRKIDSKAWAGTASAYHDTESVAHDLEVGLTFAEQVVSEAN
SVIVIIDQEGKVHRFNRLSEEYTGLREEDVIGRSAYDLFMSMEEGLASRQNITGFFQHQQ
SYEVERWINTVKGQRLFLFRNKFVHSGSGKQQKYLICSGSDITDERKAQERLRVLANTDL
VTGFANRNALQESLARALLERGENKVGLIYLDLDNFKKVNDAYGHMFGDHLLRAVSDAIQ
DCLSPDDKLARLGGDEFIILSTHAEIKTLEALSQRVLRRLTLPFRIGLIEVYTGCSAGIA
ICPEHGTDGDTLLQNADTAMYAAKEKGKNVHCVFSSGMNEKASEYMWLDTHLRKALSEKD
QLVLHYQPKVSLYGNVQSVEALLRWHSPERGLIQPQSFIPYAEESGLITPIGKWVIETAT
RQATEWQKKGLNLRVAVNLSGRQLNNASFITTLSDAMKKAGMKGCLLDFELTESCLVEDE
GAAVTMINQLHKLGAQVHLDDFGTGYSSLSQLARIPLDCIKLDQSFIRGINDNPVSQALV
RAIVAVAKTLQLTVVAEGVETAEEEKLIDEIGVDSKQGFLYAKPMPASELEHWLEEKMIA
SPHVFKHKAKQK
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactctcaagatgcttcccttctgtacctgcattttggtacaccgcgcccctat
tggcgactgagttcagacagtaatgcgctggagttatccgcagagaaaggcgttgtcaat
attgctatccctctgacgcagtggcaggcagggaaaataaagcaactgaccgggatcacc
tcaagttttgcgctggatatcaccctgttcggatcccccgtgcgtctgtatcttgtcggg
cggaaaatcgacagcaaagcctgggccggtacggcctccgcttatcatgacaccgagtct
gtcgcgcatgaccttgaagtcggactgacctttgctgagcaggtggtttccgaagccaac
tccgtgattgtcattattgaccaggaaggcaaagtccaccgttttaaccgcctgagcgaa
gaatataccggcctgcgcgaagaagatgttatcgggcgaagtgcctatgacttattcatg
tcaatggaagaaggtctggcctcacgtcagaacatcactggcttttttcagcaccagcaa
tcttatgaagtggaacgctggatcaataccgtcaaaggccagcgcctgttcctgtttcgc
aataaattcgtccacagcggcagcggcaaacagcaaaaatatctgatttgctccggctct
gacatcaccgacgaacgcaaggcacaggagcgtttgcgcgtgctggcaaacaccgatctg
gtgaccggtttcgctaaccgtaatgccttgcaggaatcccttgccagagcactcctcgag
cgtggtgaaaacaaagtcgggctgatttatctggatctggataacttcaaaaaagttaac
gacgcctacgggcatatgtttggtgatcacctgctgcgggcggtgtctgatgccattcag
gattgcctgtcgcctgacgataaactggcgcggctcggcggcgatgaattcattattctc
agcacgcatgctgagataaaaacgctggaagcgctgagtcagcgggttctgcgcaggctt
actttgccgttccgtatcggactgattgaagtgtataccggctgttcagccgggatcgcg
atttgcccggaacacggtaccgacggagacacactgttgcaaaacgccgatactgccatg
tatgcagccaaggaaaaaggcaaaaatgtacactgtgtgttctcatcaggtatgaatgag
aaagcctctgaatacatgtggttagatactcatttacgcaaagccttgtctgagaaagat
caactggtcttacactatcagccgaaagtgtcgctttacggcaatgtgcaaagcgtggaa
gcgctgctgcgctggcattctccggaacgcggtctgatccagcctcagagctttattcct
tatgccgaagaatccggtctcatcacgccaatcggcaaatgggtgattgaaacggcaacc
cgtcaggcgacggaatggcagaaaaaagggctgaatttgcgtgtggcggtgaatctttcc
ggacgacagctcaataacgcttcattcatcacgacgttatcggatgccatgaaaaaagct
ggcatgaaaggttgtctgctggatttcgagctgacagaaagttgcctggtggaagacgaa
ggtgcagcggttaccatgattaaccagttgcataaactgggcgcgcaggtgcatctggat
gatttcggtaccggttattcttcactgtcacaactggcgaggatccccctcgactgcatc
aagctggatcaaagctttatccgtggaatcaatgacaacccggtgtctcaggcgctggtg
cgggcgattgtggcggtggcaaaaacgctgcaactgacggtggtcgcggaaggggtggaa
acggcggaagaagagaagctgattgacgaaatcggtgtggacagcaaacagggctttttg
tacgccaagccaatgcccgcgagtgagctggagcactggcttgaggaaaaaatgattgct
tcaccccatgtttttaaacacaaagcaaaacagaaatag
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