KEGG   Riemerella anatipestifer RA-GD: RIA_0525
Entry
RIA_0525          CDS       T02007                                 
Name
(GenBank) Pyrimidine deaminase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
rar  Riemerella anatipestifer RA-GD
Pathway
rar00740  Riboflavin metabolism
rar01100  Metabolic pathways
rar01110  Biosynthesis of secondary metabolites
rar01240  Biosynthesis of cofactors
rar02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rar00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    RIA_0525
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RIA_0525
Enzymes [BR:rar01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     RIA_0525
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     RIA_0525
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD SNAD4 APOBEC3 APOBEC_N
Other DBs
NCBI-ProteinID: ADZ11690
LinkDB
Position
complement(484421..485440)
AA seq 339 aa
MSHEKYISRCIALAEKARGNTYPNPLVGAVIVHNGIIIGEGYHHKAGEPHAEINAINSVE
NKGLLKESTIYVSLEPCSHFGRTPPCATKITEIGFKKVVIGSADSNEKVSGKGKAMIEEA
GIEVVDKVLEERCRWLNRRFFTFHEKKRPYIILKWAESNDGFIDRNFVPTPISNTLASQY
VHKMRAEEHAILVGTQTALNDNPTLDVRHLDGRNPTRVLIDLELKVPQSFNIFNTNAPTI
IFNLHKNDNQDHLKWIKIDKENFLEELMYHLYEQQIQSIIIEGGSKMLNTFIEAQLWDEA
VVIKAPNLTLNNGTKAPIFNEKPYRQKQMRDNVLNFYKK
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgtctcacgaaaaatatataagtcggtgtattgctttggcagagaaggctagaggtaac
acttaccctaatcctttggtgggagcggtaattgtacacaatggcatcatcataggggaa
ggctatcatcacaaggcaggagaacctcatgcagaaattaacgccatcaattcggttgag
aacaaagggcttttaaaagaatctacgatttatgtttcattagagccttgttcccatttt
gggagaacgccaccttgtgctactaaaattacagaaattggattcaaaaaagtggttata
ggctcggctgactctaatgaaaaagtgagtggcaaaggtaaagcaatgatagaagaggca
ggtatagaagtggttgataaagtgttagaggaacgatgccgatggcttaacagaaggttt
tttactttccacgagaaaaaaagaccatacattatcctgaaatgggcagagtctaacgat
ggttttatagaccgaaattttgttccaacgcctatatccaatactttggcatctcaatat
gtacataagatgagagccgaagaacacgctattttggttgggacacaaacggcacttaat
gataacccaactttagatgtaaggcatcttgacggtagaaatcctaccagagttttaata
gatttagagcttaaagttcctcaaagttttaatattttcaatactaatgctcctacgatt
atttttaaccttcataaaaatgacaatcaagaccatttgaagtggataaaaattgataaa
gaaaattttttagaagaactgatgtatcatttgtatgaacagcagatacaatctatcatt
atagagggaggaagcaagatgttaaatacctttattgaagctcaactttgggatgaggca
gtggtaattaaagctcctaatttaactttgaacaatgggactaaagctcctatattcaat
gaaaaaccttaccgacaaaaacagatgagagataatgttttaaatttttataaaaaatag

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