Rousettus aegyptiacus (Egyptian rousette): 107506406
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Entry
107506406 CDS
T06036
Symbol
POLR2A
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03020
RNA polymerase
ray03420
Nucleotide excision repair
ray05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107506406 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
107506406 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
107506406 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ray03021
]
107506406 (POLR2A)
03400 DNA repair and recombination proteins [BR:
ray03400
]
107506406 (POLR2A)
Enzymes [BR:
ray01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107506406 (POLR2A)
Transcription machinery [BR:
ray03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107506406 (POLR2A)
DNA repair and recombination proteins [BR:
ray03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107506406 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
107506406
NCBI-ProteinID:
XP_015992570
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGTPSGDSACALRTIKRVQFGVLSPDELKRMSVTEGSIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggcaccccctctggggacagcgcatgcgcgctgcgcaccatcaagaga
gtgcagttcggagtcctcagtccggatgaactgaagcgaatgtctgtgacagagggtagt
atcaagtatcctgagacaactgagggtggccgccccaagcttggggggcttatggatcca
aggcagggggtgattgagcggaccggccgctgccaaacatgtgcaggaaacatgacagaa
tgtcctggtcactttggtcacattgagctggccaaacctgtgtttcatgtgggcttcctg
gtgaagacaatgaaagttttgcgctgtgtctgcttcttctgctccaaattacttgtggac
tctaacaacccaaagatcaaggacattttggctaagtccaaggggcagcccaagaaacgg
ctcacacacgtctatgacctctgtaagggcaaaaacatctgtgagggtggagaggagatg
gacaacaagtttggtgtggagcaacctgagggtgatgaggatttgaccaaagaaaagggc
catggtggctgtgggcggtaccagcccaggatccggcgctcaggcttggagctgtatgca
gagtggaaacatgtcaacgaggactctcaggagaagaagatcctgctgagtcctgagcga
gtacacgagatcttcaaacgcatctcagatgaggagtgttttgtgctgggcatggagcca
cgctatgcccggcctgagtggatgattgtcacagtactgcctgtgcctcccctctctgtg
cggcctgctgttgtgatgcagggctctgcccgtaaccaggatgacctgactcacaaactg
gctgacatcgtgaagatcaacaatcagcttcggcgcaatgagcagaatggtgcagcggcc
catgttattgcagaggatgtgaaacttctccagttccatgtagccaccatggtggacaat
gagctgcctggcttacctcgtgccatgcaaaagtctgggcgtcctctcaagtccctgaag
cagaggttgaagggcaaggaaggccgtgtgagagggaatctgatgggcaagcgagtggac
ttctcagcccgcactgtcatcacccccgatcccaacctctccattgaccaggttggcgtg
cctcgctccattgctgccaacatgacctttgcagagattgtcacccctttcaacattgac
agacttcaagaactagtgcgcagggggaatagccagtacccaggggccaagtacatcatc
cgagacaatggtgatcggattgacctgcgtttccaccccaaacccagtgaccttcacctg
cagactggctataaggtggaacggcacatgtgtgatggggacattgtgattttcaaccgg
cagccaacgttgcacaaaatgtccatgatggggcatcgggttcgcatcctcccatggtct
acttttcgcttaaaccttagtgtgacaactccgtataatgctgacttcgatggggatgag
atgaacttgcacttgccacagtctctggagactcgggcagagatccaggagcttgccatg
gtgccacgcatgattgtcaccccccagagtaatcgccctgtcatgggcattgtgcaagac
acactcacagcagtgcgcaaattcactaagagagacgtcttcctggagcggggtgaagtg
atgaacctcctaatgtttctgtccacgtgggatgggaaggtcccacagccagccatcctg
aagccccggcccctgtggacaggcaaacagatcttctccctcattataccaggccacata
aactgtatccgcacgcatagcacccatcctgatgatgaggacagtggtccttacaagcac
atctctcctggggacaccaaggtggtggtggagaatggggagctgatcatgggcatcttg
tgtaagaagtctctgggcacatcagctggctccttggtccacatctcttacctggaaatg
ggtcatgacatcactcgcctcttctactccaacattcagactgtcattaacaactggctt
ctcattgaaggtcataccattggtattggggactccattgccgattctaagacttaccag
gacattcagaatactattaagaaggccaagcaggatgtcattgaggtcatagagaaggct
cataacaatgagctagagcccaccccagggaacactctgcggcagacatttgaaaaccag
gtgaaccgcattctcaatgatgccagagacaagactggctcctcggctcagaaatccctg
tctgaatacaacaactttaagtctatggttgtgtctggagctaaaggttccaagatcaac
atctcccaggtcattgccgtcgttgggcagcagaatgtggagggcaagcggatcccattt
ggattcaagcatcggactctgcctcatttcattaaggatgactatggacccgagagtcgt
ggctttgtagagaattcctacttggctggactcacacccaccgaattctttttccatgcc
atggggggtcgtgagggcctcattgacacagctgtcaagactgctgagactgggtacatc
caacggcggctaatcaagtccatggagtcagtgatggtgaagtatgatgcaactgtgcgg
aactctatcaaccaggtggtacagctgcgctatggcgaggatggcctggcaggcgagagt
gttgagttccagaacctggctacccttaagccttccaacaaggcttttgagaagaagttc
cgctttgattataccaatgagagggccctgcggcgcactctgcaggaggatctggtgaag
gatgtactgagcaacgcgcacattcagaatgagctggagagagaatttgagcggatgcgt
gaggatcgggaggtgctcagggtcatcttcccaactggcgacagcaaggttgtcctcccc
tgtaacctgttgcgcatgatctggaatgctcagaaaattttccacatcaaccctcgcctt
ccctccgacctgcaccccatcaaggtagtagagggagtcaaagaactgagcaagaaactg
gtgatcgtgaatggggatgacccactgagccggcaggctcaggagaatgccactctgctc
ttcaacattcaccttcgatccacactgtgttcccgccgcatggctgaggaatttcggctc
agtggagaggccttcgactggctgcttggagagatcgagtccaagttcaaccaagccatt
gcccatcctggggaaatggtgggcgctctggctgcacagtcccttggagaacctgcaacc
cagatgaccttgaatacttttcactacgctggtgtgtctgctaagaatgtgacattgggt
gtgccccggcttaaggagctcatcaacatttccaagaagccaaagaccccctcacttact
gtcttcctgctgggccagtctgctcgagatgccgagagagctaaggacattctgtgccgc
ctggaacatacaacattgaggaaagtgactgccaacacagctatctactatgacccaaac
ccccagagcacggtggtggcagaggatcaggaatgggtgaatgtctactatgagatgcct
gattttgatgtggcccgaatctccccctggcttttgcgagtggagctggaccggaagcac
atgactgatcgcaagctgacgatggaacagattgctgaaaagatcaatgctggttttggc
gatgacttgaattgcatctttaatgatgataatgcagagaagctggtactccgtatccgc
attatgaacagtgatgaaaacaaaatgcaagaggaagaagaggtggtggataagatggat
gatgacgttttcctgcgctgcattgagtccaacatgctgacagatatgaccctgcagggt
attgagcagatcagcaaggtgtacatgcacttgccacagacagacaacaagaagaagatc
attatcacagaggacggggaattcaaggccctgcaggagtggattctggagacggacggt
gtaagcttgatgcgggtgctgagtgagaaggatgtggaccccgtgcgcactacgtccaat
gacattgtggagatcttcacggtgctgggtattgaagccgtgcggaaggccctggagcgg
gagctttaccatgtcatctcctttgatggttcctacgtcaattaccggcacttggctctc
ttgtgtgatactatgacctgtcgtggccacctgatggccatcacgcgacatggagtcaat
cgccaggataccggacctctcatgaagtgctcctttgaggaaacggtggatgtgcttatg
gaagcagccgcgcatggagagagtgaccctatgaagggggtgtctgaaaatatcatgctg
ggccagctagctccagctggcactggctgttttgaccttctgcttgatgcggagaagtgc
aagtatggcatggagatccccaccaacatccctggcttaggggctgccggacccactggc
atgttcttcggttcggcacccagtcccatgggaggaatttctccagccatgacaccctgg
aaccagggtgcaaccccagcctatggcgcctggtcccccagtgttgggagtggaatgacc
ccaggggcagctggcttctctcccagtgctgcttcagatgccagcggcttcagccctggt
tactcccctgcctggtctcccacgccaggctccccaggctccccaggcccctcaagccca
tacatcccctcaccaggtggtgcaatgtctcccagctactccccaacatcccctgcctac
gagccccgctcccctgggggctacacaccccagagtccttcctattcccccacttcaccc
tcctactccccaacttctccatcctattctccaaccagtcccaactatagtcccacgtca
cccagctattcaccaacttctcccagctactctccgacctctcccagctattccccaacc
tctcctagttattctcccacctctcccagctattctccaacttccccaagctactcaccc
acatcgcctagctactcaccaacgtctcccagctactcaccaacatctcccagctactca
ccaacctctcccagctactcgccaacgtcacccagctattctcccacctcccccagctac
tcaccaacatctcctagttattctccaacatcaccaagctactcaccaacttccccaagt
tactcacccaccagccctaactattctccaaccagtcccaattataccccaacatcaccc
agctatagtccaacatcacccagctactcacctactagtcccaactatacaccaacaagc
cctaactacagcccaacctctccaagctactctccaacttcacccagctactcccccacc
tcaccaagttactccccttcaagcccacgctatacaccacagtctccaacctatacccca
agttctcccagctacagccccagctctcccagctacagccctacctcgccaaagtacacc
ccaaccagcccttcctacagtccaagctcaccagagtataccccaacctctcccaagtac
tcacctaccagcccaaaatattcacccacttctcccaagtattctcctaccagccccacc
tattcacccaccaccccgaaatactcaccaacatctcctacttattcaccaacttctcct
gtctacaccccaacctcccctaagtactcacctactagccccacttactcacctacctcc
cccaagtactcacccaccagccccacctactcacccacctcccccaaaggctctacctac
tcgcccacttccccaggctactcgcccactagccccacttatagtctcaccagcccagcc
atcagcccagatgacagtgatgaagagaactga
DBGET
integrated database retrieval system
