Rousettus aegyptiacus (Egyptian rousette): 107509550
Help
Entry
107509550 CDS
T06036
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray01524
Platinum drug resistance
ray03430
Mismatch repair
ray05200
Pathways in cancer
ray05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107509550 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107509550 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
107509550 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
107509550 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ray03400
]
107509550 (MSH6)
DNA repair and recombination proteins [BR:
ray03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107509550 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
107509550
NCBI-ProteinID:
XP_015997663
UniProt:
A0A7J8FKS9
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MSRQSTLYSFFPKSPALNKANKAPVRASGEGGATAATGASPSPGGDAAWSEAGPGPGPLE
SSAPPPEARNLNGGLRRSAATSVPSSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKCARVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRAD
EALNKDKIKRLELAVCDEPSEPEEEEMEVGATYASDKSEEDNEIESEDEVRPKVQGSRRS
SRQIKKRRVLSDSESDIGGSDVEFKPDAKEEGSSDEISSGMGDSDSEGLQSSVKVAPKRK
RMVTGNGSLKKKSSRKEMPPATKRASGISSETKSTLSAFSAPQNSESQAHVSGGCDDSNR
PTVWYHETLEWLKDGKRRDMHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNF
DLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA
RVEQTETPEMMEARCRKMAHISKHDKVVRREICRVITKGTQTYSVLEGDPSENYSKYLLS
IKEKEEDTSGHTRVYGVCFVDASLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNL
STETKIILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFTEKLNEDNGVKLPQVLKS
MTSECDALGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSAIR
PGAVFAKVNQRMVLDSVTLNNLEIFSNGTNGTTEGTLLEKIDTCHTPFGKRLLKQWLCAP
LCNPYAINDRLDAIEDLMVVPDKISEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSR
AIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEVVDDFKSKILKQIVTLQTKNPEGH
FPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSR
IGCRSIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA
EERRDVSLKDCMRRLFYNFDKNYKDWQAAVECITVLDVLLCLANYSRGGDGPMCRPVLLL
PKEDTPVFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEEEKENGRAYCVLVTGPNMGGK
STLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI
LTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNV
AVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARVANLPEEVIQKGHRKA
REFEKTTHSLRLFREVCLASERSTIDAEAVHKLLASIEEL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtatagcttcttccccaagtctccagcgctgaataaagcc
aacaaggccccggtcagggcctcaggtgaaggcggcgccaccgctgctactggggcctcc
ccttcccctggcggggatgcagcctggagcgaggccgggcctgggcccggccccttggag
agctccgcgccacctcccgaggcaaggaacctcaacggagggctgcggagatcggcagcg
acttcggttccctccagttcttgtgacttctcaccaggtgatttggtttgggccaagatg
gagggttacccctggtggccttgcctggtttacaaccacccttttgatggaacattcatc
cgtgagaaagggaagtgtgcccgagttcatgtacagttttttgatgacagcccaacaagg
ggctgggttagcagaaggctcttaaagccatatacaggttcaaaatcaaaggaagcccag
aaaggaggtcatttttacagtgcaaagcctgaaatactcagagcaatgcaacgtgcagat
gaagccttgaataaagacaagattaagaggcttgaattggcagtctgtgatgagccctca
gaaccagaggaggaagaaatggaggtaggtgcaacttatgcatcagataagagtgaagaa
gataatgaaattgagagtgaagatgaagtgcggcctaaagtgcaaggatctaggcgaagc
agccgccagattaaaaaacggagagtcctttcagactccgagagtgacattggtggctct
gatgtggaatttaagccagatgctaaggaggaaggaagcagtgatgaaataagcagtgga
atgggggacagtgacagtgaaggcctgcagagttctgtcaaagttgctccaaagaggaag
agaatggtgactggaaatggctctctcaaaaagaaaagttcaaggaaagaaatgccccca
gccaccaaacgagcaagtggcatttcatcagaaaccaagagtactttgagtgctttctct
gcccctcaaaattctgaatcccaggcccacgttagtggaggatgtgatgatagtaatcgc
cccactgtctggtatcatgaaactttagaatggcttaaggacggaaaaagaagagatatg
cacaggaggcgacccgatcatcctgattttgatgcatctacactgtatgtgcctgaggat
ttccttaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaacttt
gatcttgtcatattttataaggtggggaagttttatgagctgtaccacatggatgctctt
attggagttaacgaactagggcttgtattcatgaaaggcaactgggcccattctggtttc
cctgaaattgcatttggcagatattcagattctctggtccagaagggctataaagtagca
cgagtggaacagactgagaccccagaaatgatggaggcacgatgccgaaagatggcacat
atatctaaacatgataaagtggtgaggagggagatttgtagggtcattaccaagggtaca
cagacatacagtgtgctggaaggtgacccctctgagaactacagtaagtatcttcttagc
atcaaagaaaaggaggaagatacttctggccacactcgtgtatatggtgtatgctttgtt
gatgcttcactgggaaagtttttcataggtcagttttcagatgatcgccattgttcaagg
ttcaggactctagtggcacattatcctccggtacaagtcctgtttgagaaaggcaatctc
tcaacagaaacaaagatcattctgaagggttcattatcttcttctcttcaggaaggtctg
atcccaggctcccagttttgggatgcagccaagactttgagaactctccttgaagaagga
tattttacagaaaagttaaatgaggacaatggggtgaagttaccccaagtgcttaaaagt
atgacttcagagtgtgatgctctaggattgacaccaggagagaagagtgaattggccctc
tctgcgctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctttta
tcaatggctaattttgaagaatatattcccttggattctgacatggtcagtgctataaga
cctggtgctgtctttgctaaagttaatcaacgaatggtgctagattctgtgacattaaac
aacttggagattttttcgaatggaacaaatggtactactgaaggcaccttactagaaaag
attgatacttgccatactccttttggtaagcggctcctaaagcaatggctttgtgcccca
ttgtgtaatccttatgctatcaatgatcgtctagatgctatagaagacctgatggttgtg
cctgacaaaatctctgaggttgtagaccttttaaagaagcttccagaccttgagaggcta
ctgagtaaaattcataatgttgggtctcctctgaaaagccagaaccacccagatagcagg
gctataatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttctgct
ctggaaggattcaaagtaatatgtaaaattatagagattatggaagaagttgtcgatgac
tttaagtctaaaatccttaagcagatcgttacactgcagacaaaaaatcctgaaggccat
tttcctgatttgactatagaactaaacagatgggatacagcctttgaccatgagaaggct
agaaagactggactgattactcccaaagcaggatttgactctgattatgaccaagctctt
gctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagtaga
attggctgtaggagcattgtctattgggggattggaaggaaccgttaccagttggaaata
ccagaaaatttcatcacccgtaatttgccagaagaatatgagttgaaatctaccaaaaaa
ggctgtaaacgctattggaccaaaactattgagaagaagttggctaatctgataaatgct
gaagaacggagagatgtatcattgaaagactgcatgcggcgactgttctataattttgat
aaaaattacaaggactggcaggctgccgtagagtgcatcacagttttggatgtcttattg
tgcctggctaactacagtagagggggtgatggtcctatgtgtcgtccagtacttttgttg
ccaaaagaagacactcctgtcttcttagaccttaaaggatcacgccatccctgcattaca
aagaccttttttggagatgactttattcctaatgacattctaataggctgtgaggaagaa
gagaaggaaaatggcagagcttactgtgtgcttgttactggaccaaatatggggggcaag
tctacactcatgagacaggctggcctgttagctgtcatggcccagatgggttgttatgta
cctgctgaagtatgtaggctcacaccaattgatagagtgtttactagacttggtgcctca
gacagaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgccagtata
cttacacatgcaacagcacattctctggtgcttgtggacgaattaggaagaggtactgca
acattcgatgggacagcaattgcaaatgcagttgttaaagaacttgctgagaatataaag
tgtcgtacattgttttctactcactatcattcattagttgaagattattctcaaaatgtt
gcagtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagaccccagccag
gagactattaccttcctctataagtttattaagggagcttgtcctaaaagctatggcttt
aatgcagcaagggttgctaatcttccagaggaggttattcaaaagggacatagaaaagca
agagaatttgagaagaccactcactcactgcgattatttcgggaagtttgtctggctagt
gaaaggtcgactatagatgcggaagctgtccataagttgctggcttcgattgaggaatta
tag
DBGET
integrated database retrieval system
