Rhodopirellula baltica: RB8469
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Entry
RB8469 CDS
T00134
Symbol
odc
Name
(GenBank) lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rba
Rhodopirellula baltica
Pathway
rba00330
Arginine and proline metabolism
rba00480
Glutathione metabolism
rba01100
Metabolic pathways
rba01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RB8469 (odc)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RB8469 (odc)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
RB8469 (odc)
Enzymes [BR:
rba01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
RB8469 (odc)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
CAD78655
UniProt:
Q7UFM7
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All DBs
Position
4520779..4521975
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AA seq
398 aa
AA seq
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MVPNWRHPSRMIASTILRAPNARTAQPNLSFDLAKELAEKHGTPLLVVSRSKAIETYWAM
KNALPGVDLYYAAKANPDLHFLSTLNGENAFIDVCSPGELKAALAAGFTPDRMLHTHPCK
TDANLWECYEAGVNWFVFDNPIEAEKIRRLTPDVNLLLRLATTGASSRINLSAKFGCPMH
EALELLATAKAKGLKVRGFSFHVGSQCLNPQDYVEVLRSVREVWDEATKAGHHLEVLDIG
GGFPAPYREDAPSIEAFGEVITNGLREIFGDLPIRLIAEPGRGLCTESVTLITRVIGKSR
RWELPWFFLDDGIYGSFSGKIFDHTDFPLLVENDGSRETVPCVVAGPTCDSTDIVSRDQW
LPDLEVGELVLVPSMGAYAAASASPFNGLPMANSVAID
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
ttggtccccaattggaggcaccccagccgcatgatcgcatcgaccattctgcgcgcaccc
aacgcccgaacggctcagccgaacctttccttcgacctcgccaaagagctcgctgaaaaa
cacggcacacctttgcttgtcgtatcacgatccaaagccatcgaaacctactgggcgatg
aagaacgccctgccaggtgttgatctttactatgcggcgaaagccaacccggacctgcat
ttcctgtcgacgctcaacggcgaaaatgcattcatcgacgtctgctcgcctggcgaattg
aaggcagcactcgccgctggtttcacgccagaccgcatgctgcacacgcacccatgcaag
accgatgcaaacctttgggaatgctatgaagccggcgtgaactggttcgtcttcgataac
ccaatcgaagcggaaaagattcgccgactgactcccgatgtgaacttgttgttgcgtttg
gcaacgaccggagcctccagccgaatcaacctgtcggcgaagttcggttgccccatgcac
gaagcgctggaactattggcaacggcaaaagccaaaggcctgaaagtccgcgggttctcg
ttccatgtcggcagtcagtgcctcaacccacaagactatgtcgaagtgctccgcagcgtt
cgcgaagtctgggacgaagccaccaaagccggacaccacttggaagtcctcgacatcggt
ggcggtttccccgctccgtatcgcgaagacgcgccttcaatcgaagcctttggcgaagtc
atcaccaacggactgcgagagatcttcggcgacttgccgattcgtttgatcgccgaacca
ggccgcgggttgtgcaccgaaagcgtgaccctgatcactcgcgtgatcgggaagagccgt
cgatgggaattgccttggttcttcctcgacgatggcatctacggatcgttctcgggcaag
atcttcgaccacacggacttcccgttgctggtcgaaaacgatggctcacgagagaccgtt
ccttgcgtggtcgccggtccaacctgcgactccaccgatatcgtttcgcgtgatcagtgg
cttcctgatttggaagtcggtgaattggtcttggttccatcgatgggtgcttacgctgcc
gccagcgcatcgcctttcaatggattgccgatggccaacagcgtcgcaatcgactga
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