Rouxiella badensis: H2866_08510
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Entry
H2866_08510 CDS
T06835
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rbad
Rouxiella badensis
Pathway
rbad00540
Lipopolysaccharide biosynthesis
rbad01100
Metabolic pathways
rbad01250
Biosynthesis of nucleotide sugars
Module
rbad_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
H2866_08510 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rbad01005
]
H2866_08510 (rfaD)
Enzymes [BR:
rbad01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
H2866_08510 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
rbad01005
]
Core region
H2866_08510 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
ThiF
KR
Htt_C-HEAT
Motif
Other DBs
NCBI-ProteinID:
QOI57134
LinkDB
All DBs
Position
complement(1844205..1845131)
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AA seq
308 aa
AA seq
DB search
MIIVTGGAGFIGSNIIKSLNDMGYRDILVVDNLKDGTKFVNLVDLDIADYVDKEDFIASI
VAGDDLGDIDAVFHQGACSSTTEWDGKYMMDNNYQYSKDILHYCLDRSIPFLYASSAATY
GSQNTSFVEDRKYEQPLNVYGYSKFLFDQYVREILPHAESQITGFRYFNVYGPREGHKGS
MASVAFHLNNQILAGENPKLFAGSEDFKRDFIYVGDVAAVNLWFWQNGKSGIFNCGTGRS
ESFQEVADAVVAFHKKGAIETIPFPEKLKGRYQSFTQADMTALRGAGYDKPFKTVAEGVS
EYMAWLNR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcactggcggtgccggttttatcggcagcaacattatcaagtcgctcaat
gatatgggatatcgcgatattttagtggttgataacctcaaagatggcaccaagtttgtc
aatctcgtcgacctggatatcgcggattacgtagataaagaagacttcatcgccagcatc
gttgccggtgatgatttaggcgacattgatgcagtattccaccagggtgcatgttcttcc
accaccgagtgggatggcaaatacatgatggacaacaactatcagtattccaaagacatc
ctgcactactgtctggatcgcagcatcccgttcctgtatgcctcatcagccgccacctac
ggcagccagaacaccagcttcgtagaagacagaaagtacgagcagccgctgaacgtctac
ggttactcgaaattcctgttcgaccagtacgtgcgtgaaattctgccgcacgccgagtcc
cagatcactggtttccgctatttcaacgtctacggaccgcgtgaaggccataaaggcagc
atggcaagcgtggcattccacctgaacaaccagattctggccggtgagaatccaaaactg
tttgccggtagcgaagacttcaaacgtgacttcatttacgttggcgacgtggccgcagtg
aacctgtggttctggcagaacggtaaatcaggcatcttcaactgtggaaccggccgttca
gaatccttccaggaagtggccgacgccgttgtcgccttccataagaaaggcgctatcgag
accatcccgttccctgaaaaactgaaaggtcgctaccagtcctttactcaggcagacatg
actgcactgcgcggcgcgggctacgacaagccgttcaaaaccgttgcagaaggcgtctct
gagtacatggcctggctcaatcgttaa
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