Rhizobium bangladeshense: J2J98_12480
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Entry
J2J98_12480 CDS
T07228
Symbol
cobN
Name
(GenBank) cobaltochelatase subunit CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban00860
Porphyrin metabolism
rban01100
Metabolic pathways
rban01240
Biosynthesis of cofactors
Module
rban_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
J2J98_12480 (cobN)
Enzymes [BR:
rban01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
J2J98_12480 (cobN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Thrombin_light
Motif
Other DBs
NCBI-ProteinID:
QSY87049
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Position
complement(2554030..2558094)
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AA seq
1354 aa
AA seq
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MHLLLAQQGTISDGEEAIDLGQSPGDILFLSAADTELAAVAAAYRGCEGMPHSLRLANLM
SLKHPMSIDTYVERTARHAKLIVVRALGGASYFHYALEALHSVAARNGALIAALPGDAKP
DAGLAPFSNVALEDLNGLWGYLIEGGDTNTRSFLAYASAMLSGAEKPAPAVPLMKAGIWW
PERGAIGVEEWRRVTAPSSTKAAIPPSVLPDISPLVGEMSGRTEGGTPSSTEEVEFEPTP
PIVAISFYRALVQSGETEPVEALVEALAALGLRPLPVFAYSLKDPVSTGILESVFSALKP
DVVINTTGFAVSAPGADRQPTVLEANDAIVLQAVLSASSKEAWEASSQGLSARDLGMNVA
LPEVDGRVLARAISFKTAARYDAAVETNIVANVPDAGRVRYTAELAANWMRLRRTPAHSR
RIALVMANYPNRDGRLGNGVGLDTPAGSIEVLRAMAAAGYPVADAPADGDALIRHLMEGP
TNSGHDGKVIRETLSLSHYKGFLESLPKKIQDEVTDRWGGPEDDPYFCGSGFALPFARFG
GILVGIQPARGYNIDPKESYHSPDLVPPHGYLAFYAFLRGEFGAHAVIHMGKHGNLEWLP
GKALALSEDCYPEAILGPLPHLYPFIVNDPGEGTQAKRRTGAVIIDHLTPPLTRAESYGP
LKDLEALVDEYYEASGGDPRRIRLLSRQILDLVTDIGLDRDAGIAKGESEGEALKKLDAY
LCDLKEMQIRDGLHVFGVSPQGRRLTDLTVALARVPRGLGEGGDASLQRAIAADAGLSVV
PAIPPSALPDISPTRGEIGKSLGLGTKEALENASPSAEEMERDLSSPTSHLVGEMFSRTE
GGASIFDPLDCDMATAWARPKPAILADILDAPWRTNGDTVERIELLAAKFVFGEMECPPL
WSQTRSVLSEIETHLKPSILACGRAEIDGLLKGLDGRFVAPGPSGAPTRGRPDVLPTGRN
FYSVDSRAVPTPAAYELGKKSAELLVRRYVQDHGEWPVSFGLTAWGTSNMRTGGDDIAQA
LALIGVKPLWDMSSRRVTGYEIIPPAALGRPRVDVTLRISGFFRDAFPEQIALFDKAIRA
VGALDEDEVDNPIAVRMRGEAASLAAAGLDAASARRRAGYRVFGSKPGAYGAGLQALIDE
KGWERRADLAEAYLVWGSYAYGAGEEGRAERGLFEERLRSLQAVIQNQDNREHDLLDSDD
YYQFEGGMAAAAEQLAGTRPAIYHNDHSRPERPVIRSLEEEIGRVVRGRVVNPKWISGVM
RHGYKGAAEIAATVDYLFAFAATTGAVGAHHFDAVYRAFVADPAVRSFMIEKNPAAFDEM
RERLGEAIDRGLWTPRSNSARFDLTATQLNEVHR
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcttctggcccagcagggaacgatcagcgacggcgaggaggcaatcgacctc
ggacagtcgccgggcgatatcctgttcctttcggctgccgacaccgaacttgccgcggtc
gcggccgcctatcgcgggtgtgaggggatgcctcattcgctgaggctcgcgaatctgatg
agcctcaagcatccgatgtcgatcgatacctatgtcgaacgaacggcccggcacgccaag
ctgatcgtggtgcgtgcgctcggcggcgccagctatttccattatgcgctggaggcgctg
cactccgttgccgctcgcaacggtgcactgattgcggcattgcctggggatgcgaagccg
gacgccgggctggcgccgttttcgaatgtagcgcttgaggatctcaatgggctctggggc
tatctgatcgagggcggcgataccaatacgcggagcttccttgcttatgcctcggcgatg
ctgtcgggcgcagagaagccggcgccggcagtgcctttgatgaaggcggggatctggtgg
ccggagcgaggggcgatcggggtcgaggagtggcggcgggtgacagcaccgtcatcgacc
aaggcggcgatacccccctctgtcctgccggacatctcgccccttgtcggggagatgtcc
ggcaggacagaggggggtaccccaagctcgacagaagaggtggaattcgaacccacgccc
cccatcgtcgccatcagcttctaccgtgccctcgtccagagcggcgagaccgagccggtc
gaggcgctggtcgaggccctggccgcacttggcctgcggccgctgccggtctttgcctat
agcctgaaggatcccgtttcgacaggcattctcgagagcgtgttttcggcgctgaaaccc
gatgtcgtcatcaacacaacgggctttgcggtctctgcaccgggcgcggaccggcaaccg
acggtactggaggcgaatgacgccatcgtgctgcaggcggtcctgtcggcctcgtcgaag
gaagcctgggaggcttcgtctcagggcctctcggcgcgcgatctcggcatgaatgtggcg
ctgcctgaagttgacgggcgcgtgttggcgcgggcaatctccttcaagacggcggcccgc
tacgatgcggcggtcgagaccaatatcgttgcaaacgtgcccgatgcgggccgggtgcgc
tatacggcggaactcgccgccaactggatgcggctgcgtcgcacgccggcccatagccgg
cgcatcgccctcgtaatggcgaactatccgaaccgcgacggccggctcggcaacggcgtc
ggccttgacacgccagccggcagcatcgaggtgttgcgcgcgatggcggcggcgggctat
ccggtcgccgatgctccggccgacggcgacgcgctgatccggcatctgatggaggggccg
accaattccgggcacgacggcaaggttatccgcgagacgctttcgctgagtcactacaaa
ggtttcctggaatctcttcccaagaagattcaggatgaggtgacggaccgctggggcggt
ccagaagacgatccctatttttgcggtagcggcttcgccctgccttttgcccgcttcggc
ggcatcctcgtcggcatccagccggcgcgcggatacaatatcgaccccaaggaaagctat
cattcgccggatctcgtgccgccgcacgggtatcttgccttctatgccttcctgcgcggc
gaattcggcgcgcatgcggtcattcacatgggcaaacacggcaatctcgaatggctgccg
ggcaaggcgctggcgctttcggaagattgttatcccgaggcaatcctcgggccgctaccg
catctctatcccttcatcgtcaacgatccgggcgagggcacgcaggccaagcgccgaact
ggcgcggtcatcatcgaccacctgacgccacctttgacgcgggccgagagttacgggccg
ctcaaggacctggaggcgcttgtcgacgaatattacgaagcctccggcggcgaccctcgc
cgcatccgattgctcagccggcagattctcgaccttgtgaccgatatcggcctcgaccgc
gatgcggggattgcgaaaggcgagagcgaaggtgaggcgctgaagaagctcgacgcctat
ctctgcgatctcaaggagatgcagatccgcgatgggctgcatgtgttcggcgtttcgccg
caggggcggcggcttacggacttgaccgtggcgttggcgcgggtcccgcgcgggctggga
gagggcggggatgcgagtttgcagcgggcgattgctgcggacgcgggattgagcgtggtg
cccgcgatacccccctctgccctgccggacatctcccccacaaggggggagatcggcaag
tcgcttgggcttggtacaaaagaagcgttggagaatgcctcaccttcggcggaggagatg
gagcgagacctctcatccccgacctcccaccttgtgggggagatgttcagcaggacagag
gggggagcctccatcttcgaccctctcgattgcgacatggccaccgcctgggctcgccct
aaaccggcaatcctagcagatattctcgacgccccctggcgaaccaacggcgataccgtc
gaacgcatcgaattgctcgccgcgaagttcgttttcggcgagatggaatgcccgcctctc
tggtcccaaaccagatcggtactctccgagattgaaactcatctcaaaccctccatcctc
gcctgcggccgcgccgagatcgatgggcttctcaaaggactcgacggccgcttcgtcgcc
cccggcccctccggtgccccgacccgcggccggccggacgtgctgccgacgggccgaaat
ttctattcggtcgacagccgcgcggtgcctacgccagcggcctatgaactgggcaagaaa
tcggccgaattgctggtgcgccgctatgtgcaggatcacggcgaatggccggtttccttc
gggctgacggcctggggcacgtcgaacatgcgcaccggcggtgacgatatcgcccaggcg
ctggcgctgatcggtgtcaagccgctctgggacatgagttcgcgccgcgttaccggctac
gagatcataccgccggcggcgctcgggcgaccgcgggtggatgtgacgctgcgcatatcc
ggcttctttcgcgatgcttttccggagcagatcgcgctgttcgacaaggcgatccgggct
gttggcgcgctcgacgaggatgaggtcgataatccgatcgctgtgcgtatgcgcggcgag
gcggcaagccttgcagccgccggtctcgacgccgcgtccgcgagacggcgggcgggctac
cgcgtcttcggctcgaaacccggcgcctatggtgcgggcctgcaggcgctgatcgacgag
aagggctgggagcggcgagccgatctcgccgaagcctatcttgtctggggctcctatgct
tatggcgccggtgaggagggcagggccgagcgcggtctgttcgaggaacggctgcgctcg
ctgcaggccgtcatccagaaccaggacaatcgcgagcacgatctgctcgacagcgacgac
tattaccagttcgagggcggcatggcggcggcggccgaacagctcgcagggacgcggcct
gcaatctatcataacgatcactccaggcccgaacggccagtgatccgttcgctcgaagag
gaaatcggccgcgtcgtgcgcggccgagtcgtcaatccgaaatggatatcgggcgtcatg
cgccacggctacaagggagcagccgagatcgccgccaccgtcgattatcttttcgccttc
gcggcgacgacgggcgcggtcggtgcgcatcatttcgacgcggtctatcgggccttcgtc
gccgatccggccgtgcgcagcttcatgatcgagaagaacccggcggcattcgacgagatg
agggagcggctcggagaagcgatcgaccgcggcctttggacgccgcgcagcaattcggcc
cggttcgacctgaccgccacacaactgaatgaggtgcatcgatga
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