Robiginitalea biformata: RB2501_05565
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Entry
RB2501_05565 CDS
T00992
Name
(GenBank) lycopene cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi00906
Carotenoid biosynthesis
rbi01100
Metabolic pathways
rbi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
RB2501_05565
Enzymes [BR:
rbi01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
RB2501_05565
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Motif
Pfam:
Lycopene_cycl
NAD_binding_9
NAD_binding_8
Pyr_redox_3
HI0933_like
DAO
Motif
Other DBs
NCBI-ProteinID:
EAR16341
UniProt:
A4CHD3
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Position
500301..501506
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AA seq
401 aa
AA seq
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MEHFDFIIIGGGASGLLLAEAMGRDTWFDGKRIALFEKQEQKGNDRTWCFWESGEGAFDE
LIETRWDRMRFRGTGIDRVLPLLPLTYKMLRGEDFYASYYQKIATCPNIHVIREAVNHVE
ERPDGAFLKTSRASYTTSRVFSSVPFSQPPLPGRPYPLIRQHFIGWRVRVPRPVFDPDTP
TFMDFGIPQRGNTRFMYVLPDSPTEALLEYTLFSKDLLEPGEYEAAIEAYLREEYGVGEY
EILEKERGSIPMTCNDFTARDSKHITHIGIAGGWARPSTGYTFWNSTQLVPRLVKALKSG
KRLQMARRDRFWFYDLVLLEVLAGNNARGGEVFSALFRRVPPTRILRFLHQQTSLGEDLR
IIAACPKRLFIRALWRSFLKSLGGAATPQNRAAPPWPGGFR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggaacattttgactttatcatcatcgggggcggggcctccggcctcctgctcgccgaa
gccatggggcgcgacacctggtttgacgggaagcggattgccctgttcgagaaacaggag
caaaaaggcaatgaccggacctggtgcttttgggagtccggcgagggcgctttcgacgaa
ttgatcgaaacccgctgggaccggatgcgttttcggggaaccgggatcgaccgggtgctc
cccctgcttccgctgacctacaaaatgctccgcggggaagatttttacgcgtcctactac
caaaagatcgccacctgcccgaatatccatgtcatacgcgaagcggtaaaccatgttgag
gagcgccccgatggcgcctttctgaagacgtcccgggcctcctatacaacctcccgggtt
ttcagcagcgtcccgttttcccagccgcccctccccgggcgcccctatccgctgattcgc
cagcattttatcgggtggcgcgtccgggtcccccggccggtctttgatccggacaccccg
acctttatggattttggcatcccgcagcgcggaaacacgcgctttatgtatgtgctcccg
gactccccgacggaggccctgttggaatacacgctcttttcaaaagacctgctggaaccc
ggggaatacgaggcagccattgaagcgtacctccgggaggaatacggggtcggggaatat
gaaatcctggaaaaagaacgcgggagcatcccgatgacctgcaacgattttacggcccgg
gacagcaaacatatcacccatatcgggattgccgggggctgggcccgtccaagcacgggc
tacaccttctggaacagtacgcagctggttccccggttggtaaaggccctcaaatccggg
aagcgcctgcaaatggcgcggcgggaccgcttctggttctacgatttggtgttgctggag
gtgctggcgggcaacaatgcccgcgggggtgaggtgttttccgccctcttcaggcgcgtc
ccccccacccggatattgcgtttcctgcaccagcagacttccctgggcgaagacctccgg
attattgcggcctgtccgaaacgcttgtttatccgcgccttgtggcgttccttccttaaa
agtctcggcggagcagccactccccaaaatcgcgcagcgccgccttggcccgggggtttc
cggtaa
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