Rhizobiales bacterium NRL2: TEF_12455
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Entry
TEF_12455 CDS
T04419
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm00190
Oxidative phosphorylation
rbm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
TEF_12455
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TEF_12455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbm03019
]
TEF_12455
Enzymes [BR:
rbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
TEF_12455
Messenger RNA biogenesis [BR:
rbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TEF_12455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
ANK83456
LinkDB
All DBs
Position
2675940..2678111
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AA seq
723 aa
AA seq
DB search
MTTATKRPPEPPSPAIEAIDMTSPGRFINRELSWLQFNARVMEESQNPRHPLLERVRFLS
ISASNLDEFFMVRVAGLWDMVQADVKTVTPDGLTPSQQLEKIDDLAGRLMRQQQSYWSAL
QKELRENGIAIVEADELSATEREWLDGHFLDQILPVLTPLAIDPAHPFPFIPNLGLAMIA
QLKRTDDGRLLDAIVPIPQHVARFVRLPSDSIRFVAVSQLIAMYMSRLFPGYEIVSRGQI
RAIRDSDIELEEESEDLVRTYESALRRRRRGHIVRLQITGGLNDHLKRLVVEETDTRPQD
IVVVEGMLALADIRRVIVDERHDLLFKPYHARFPERIRQFGGDCFAAIRSKDIVVHHPFE
SFDVVVQFLRQAAEDPNVLAIKQTLYRTSDNSPIVQALIAAAEAGISVTAMVELKARFDE
ARNIKWARDLERAGVQVVYGFVELKTHAKISLVVRREKDGLRTYSHFGTGNYHPITAKIY
TDLSYFTADPQLGREASAIFNFLTGYARPEGLKEIAYSPHTLAPKVLAEIEGEIEHAKAG
RPGCIWAKLNSLVDPDIIDALYRASQAGVEVELVIRGICCLRPGVPGLSENIRVRSMIGR
FLEHSRIVAFGNGAELPSRQAKVYITSADWMPRNLYRRVESFVPIKNETVHAQVLEQIMV
ANLKDDLQSWMMLPDGEYRRIPVDGEGFSAHEYFMTNPSLSGRGKAMDGDRAPLELKLDD
HDD
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagcgacgaagcggccgcccgagccgccgagtccggcgatcgaggcgatcgac
atgacgtcgcccggccgcttcatcaatcgcgagctgtcctggctgcagttcaacgcccgc
gtgatggaggaatcccagaacccgcgtcatcccttgctggaacgggtccgcttcctgtcg
atctcggcgtccaatctcgacgagttcttcatggtccgcgtcgcgggcctctgggacatg
gtccaggctgacgtgaagacggtgacgccggacgggctgacgccgtcgcagcagctggag
aagatcgacgacctcgccggccggctgatgcgccagcagcagagctactggagcgcgctg
cagaaggaactgcgcgagaacggcatagccatcgtcgaggccgacgaactgtcggcgacg
gaacgcgaatggctggacggccatttcctcgaccagatcctgccggtcctcacgccgctg
gccatcgaccccgcgcacccctttcccttcatccccaatctgggcctggcgatgatcgcc
cagctgaagcgcaccgacgacggacgcctgctggatgcgatcgtgcccatcccccagcac
gtcgcgcgcttcgtccggctgcccagcgattccatccgcttcgtcgcggtcagccagctt
atcgccatgtacatgtcgcggctgttcccgggctacgagatcgtcagccgcggccagatc
cgcgccatccgcgattcggacatcgagctggaggaggaatcggaggacctggtccgcacc
tatgaatccgccctccgccgccgccgccgcggccacatcgtgcgtctccagatcaccggc
ggactgaacgatcatctcaagcgtctggtggtcgaggagaccgacacccggccgcaggac
atcgtcgtggtcgagggcatgctggcgctggccgacatcagaagggtgatcgtcgacgaa
cgccacgatctgctgttcaagccctatcacgcgcgcttccccgagcgcatacgccagttc
ggcggcgactgcttcgccgccatccgctccaaggacatcgtcgtccaccatcctttcgag
agcttcgacgtggtggtgcagttcctccgccaggcggccgaggatcccaacgtgctggcg
atcaagcagacgctctaccggacctccgacaattcgccgatcgtccaggcgctgatcgcc
gccgccgaggccggcatctcggtgaccgcgatggtcgagctcaaggcgcgcttcgacgag
gccagaaacatcaagtgggcccgcgatctggagcgcgccggcgttcaggtggtctacggc
ttcgtggagttgaagacccacgccaagatctcgctggtagtgcgccgggagaaggacggt
ctcaggacctactcccatttcggcaccggcaactaccacccgattacggcgaagatctac
accgacctctcctacttcacggcggacccgcaactcggcagggaagcgagcgccatcttc
aacttcctcaccggctatgcccgacccgaggggctgaaggagatcgcctattcgccgcat
accctggcgccgaaggtgctggccgagatcgagggcgagatcgagcacgccaaggccggc
cggccgggctgcatctgggccaagctgaacagcctggtcgaccccgacatcatcgatgcg
ctctaccgcgccagccaggccggggtggaggtggaactggtcatccgcggcatctgctgt
ctccggccgggcgttccgggcctgtcggagaacatccgcgtgcgcagcatgatcggccgc
ttcctggagcattcgcgcatcgtcgccttcggaaatggcgccgaactgcccagccgccag
gccaaggtctacatcacctccgccgactggatgccgcgcaacctctaccgccgggtggag
agtttcgtgccgatcaagaacgagaccgtccacgcccaggtgctggaacagatcatggtc
gccaatctgaaggacgacctgcagagctggatgatgctgccggatggagaatatcgtcgc
attccggtggacggcgagggattcagcgcgcatgaatacttcatgaccaaccccagcctg
tcgggccggggcaaggccatggacggcgaccgcgcgccgctggaactcaaactggacgac
cacgacgactga
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