Rahnella bonaserana: QNM34_02925
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Entry
QNM34_02925 CDS
T09076
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00053
Ascorbate and aldarate metabolism
rbon01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
QNM34_02925 (garD)
Enzymes [BR:
rbon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
QNM34_02925 (garD)
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Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
WHZ41274
LinkDB
All DBs
Position
complement(652357..653928)
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AA seq
523 aa
AA seq
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MSRNKDKEHATEALFIKVHESDNVAIIVNDNGLKAGTRFSNGLELIEHIPQGHKVALEPI
AQGGDIIRYGEVIGYAVRDIAQGGWIDESLVELPVAPELNSLPLATRVPPALPPLEGYTF
EGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKFPNVDGVVALNHLYGCG
VAINAPAAVVPIRTIHNLALNPNFGGEVMVVGLGCEKLQPERLLEGTPDVQAISLDDTHI
VRLQDEQHVGFQSMVDDILTVAQFHLERLNRRQRETCPASDLVVGTQCGGSDAFSGVTAN
PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAADVEVGKRLLEEMAWYDDYLSMGQ
TDRSANPSPGNKKGGLANVVEKALGSIAKSGTSAISEVLSPGQRPTKKGLIYAATPASDF
VCGTQQLASGITVQVFTTGRGTPYGLLAVPVIKMATRTTLANRWHDLMDINAGTIATGDA
TIEDVGWELFHFILDIASGRKKTWSDTWGIHNALAVFNPAPVT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtaataaagataaagaacatgcaaccgaagcacttttcattaaggttcatgaa
agcgataacgttgccattattgtgaacgataacggtttaaaagccggcacccgattttca
aatggtctggaattaattgagcatattccgcaaggccataaagttgctttagaaccgatt
gcccagggtggcgatattattcgttatggtgaagtcatcggttatgcagtgcgtgatatc
gcacagggcggctggattgacgaatccctggtggaactgccggtcgcccctgagcttaac
agcctgccgctggctacccgcgttcccccagcattaccgccgctggaaggttatactttt
gaaggttaccgcaacgccgacggcagcgtaggcaccaaaaacctgctcggtattactacc
agcgtacactgcgtggcgggtgtggtggattatgtggtcaaaatcatcgagcgcgattta
ctgccgaaattccccaatgttgacggcgttgtcgcactgaatcatttatacggctgcggt
gtggcgattaacgcgccggcagctgtggtgcctatccgtaccatccacaatctggcgctg
aacccgaactttggcggcgaagtgatggtcgtcggtttaggttgcgagaagttgcagccg
gaacgattgctggaaggtacgccggacgtgcaggcgatttccctcgacgacacgcatatc
gtccgtttgcaggatgaacagcatgtcggcttccagtcgatggtcgacgatatcctcacc
gtcgcacaattccatctcgagcgcctgaaccgccgtcagcgcgaaacctgtccggcgtct
gatctggtcgtaggcacgcaatgtggcggcagcgatgctttctctggtgtgacggctaac
ccggcggtcggttacgcctcagacctgctggtgcgctgcggcgcgaccgtgatgttctcg
gaagtcactgaagtgcgcgacgccatccacttgctgacgccgcgtgctgcggatgtcgaa
gtgggtaaacgtctgctggaagaaatggcctggtacgacgattatctgtcgatgggacaa
accgaccgcagcgccaatccgtctccgggcaacaaaaagggcggtctggctaacgtggtg
gaaaaagcgctcggctcgattgcgaaatccggcaccagcgcgatttcagaagtgctgtcg
cccggccaacgtccgactaaaaaaggactgatttacgcggccacgcctgccagcgatttt
gtctgcggcacacagcaactggcttccggtattaccgttcaggtatttaccaccgggcgc
ggtacgccttacggcctgctggcggtgccggtaattaaaatggcgacccgcaccacgctg
gcaaaccgctggcacgatctgatggacatcaacgccggcaccattgcgacgggtgacgcg
accattgaggatgtgggctgggaactgttccacttcattctcgatatcgccagcgggcgc
aagaaaacctggtctgacacctggggtatccacaatgcgctggcggtatttaacccggcg
ccggtgacctga
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