Rhizobium binae: J2J99_00605
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Entry
J2J99_00605 CDS
T07180
Symbol
speC
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rbq
Rhizobium binae
Pathway
rbq00330
Arginine and proline metabolism
rbq00480
Glutathione metabolism
rbq01100
Metabolic pathways
rbq01110
Biosynthesis of secondary metabolites
rbq04148
Efferocytosis
Module
rbq_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
J2J99_00605 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
J2J99_00605 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
J2J99_00605 (speC)
Enzymes [BR:
rbq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
J2J99_00605 (speC)
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QSY82367
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Position
complement(132453..134816)
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AA seq
787 aa
AA seq
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MIPRDVKSPTVAIPFHKMLKIVAVIDRDNVQAQELVAQIAAQGFKVEVRDDYSADASEDA
DVGAYIGSVEGGKLSAARSFLRSVRGIGFRTPIWAMADTLTIADMDVVEMAGEVDGFVYL
GQQTPTFYAKQIVSTAVNYGKSLLPPFFGGMMAYDGEANIAFDCPGHQGGQFYRKSPAGQ
LFFKYFGESIFRNDLCNADVDLGDLLIHEGPAAEAQKQAARIFGADRTYFILNGTSTSNK
VVTNAILRSGDLVLFDRNNHKSLHQGALVQAGAIPIYLPTARNSFGMIGAVDWAAWDESW
LRQKIEEHPLIADKSRAKAERPFRLACIQLATYDGTIYNVQQVMEKIGHLCDYVLWDEAW
IGYNAFHPLFDGHSPMRLKDLRADMPGLFSTQSVHKQGAGFSQASQIHKRDEHISGQRRF
VEHKRFNESLLMHVSTSPFYPLFASLDVNAKVHEGKSGEMLWDRCIELGIEVRKKLRGFV
QHYESKTASAEERWFFDPFVPDKVTISGSKHTDDVEGMRWEDMPTAVLKREQQCWRFDPQ
AKWHGYSGYAQGYAMVDPNKLTLLTPGIDRKTGEYREFGIPATVVANYLREQRVVPEKCD
LNSLLFLLTPAEDESKLNTLIAKLVKFKNLWDRDASLQEVLPTVFAANRERYAGYSVRQV
CNEMHSFYRDAGVKELQRLCFRSESFPEPAIAPKQAYEALVANNVDYVPLRQAAGRISAT
LALIYPPGIGVIVPGERWDDKARPMRDYFLAFEESFNRFPGFNYEVQGVFQERIEGRIQF
HTYVVRE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgattccgcgcgatgtgaagtctccgacggtcgccatacccttccacaagatgctgaag
atcgtggcggtcatcgaccgcgacaatgttcaggctcaggaattggtcgcacagatcgcc
gctcagggtttcaaggtggaagtgcgcgacgattattccgccgatgcctccgaggatgcc
gatgtcggcgcttatatcggctcagtcgagggcggcaagctgtcggcggctcgcagcttc
cttcgctcggtcaggggtatcggcttccgtacgccgatctgggcaatggccgacacgctg
acgatcgcggatatggatgtcgtcgaaatggctggcgaggtcgacggcttcgtttatctc
ggccagcagacgccgactttctatgccaagcagatcgtctccactgcggtcaattacggc
aaatcgctgctgccgcccttcttcggcggcatgatggcctatgacggcgaggcgaacatc
gccttcgattgccccgggcatcagggcggccagttttatcgaaagtcgcccgcaggccag
ctcttcttcaaatatttcggcgagagcattttccgcaacgacctctgcaatgccgatgtt
gatctcggcgatctgctaatccacgaaggccccgcggcggaagcccagaagcaggcggcg
cgcatcttcggcgcggatcgcacttacttcatcctgaacggaaccagcacctccaacaag
gtggtcaccaatgcgatcctgcgcagcggcgatctcgttctcttcgaccgcaacaaccac
aagtccctgcatcagggcgcgctggtgcaagccggcgccattccgatctatttgccgaca
gcccgaaattccttcggcatgatcggtgctgtcgactgggcggcctgggacgaaagctgg
ctccgacagaaaatagaggagcacccgctgatcgccgacaagagccgcgcgaaggcggaa
agaccattccgtctggcttgcatccagctcgcgacctatgacggcacgatctacaacgtc
cagcaagtcatggagaagatcggccatctctgcgactacgtgctctgggacgaggcctgg
atcggctacaatgccttccacccgctgttcgacggtcacagcccgatgcgtctgaaagac
ttgcgggccgacatgccgggtctgttctccacccagtccgtgcacaagcagggagccggc
ttttcgcaggcctcgcaaatccacaagcgggacgaacatatcagcggccagcgccggttc
gtggaacacaagcgcttcaacgaatcgctgctgatgcatgtctcgacctctcccttctat
ccgctcttcgcctcgctcgacgtcaacgccaaggtgcacgagggcaagtcaggcgagatg
ctctgggatcgctgcatcgaactcgggatcgaagttcgcaagaagctgcgcggcttcgtt
cagcattacgagtccaagaccgcgagcgccgaagagcggtggttcttcgatcccttcgtg
ccggacaaggtcaccatttcgggctccaaacatacggacgacgtcgaaggcatgcggtgg
gaggatatgcccacggccgtactcaagcgcgagcagcaatgctggcggttcgatccgcag
gcaaaatggcacggatattcgggctatgcgcagggttacgcgatggtcgatcccaacaaa
cttaccctgttgacgcctggcatcgaccgcaagaccggcgaatatcgcgagttcggcatt
ccggcgactgtcgtcgccaactatctgcgcgaacagcgtgtcgtgccggaaaaatgcgat
ctcaacagtcttctcttcctgctgacgccggcggaggatgagagcaagctgaacacgctc
atcgccaagctggtcaagttcaagaatctctgggatcgcgacgcgtcgctgcaggaggtg
ctgccgaccgtcttcgccgccaatcgcgagcgctatgccggctattcggtccggcaggtc
tgcaacgaaatgcattccttctatcgcgatgctggcgttaaggaactgcagcgcctctgc
tttcgctccgagagcttcccggagccggccatcgctcccaagcaggcctatgaagccctg
gtcgccaacaatgtcgactacgtgccgttgaggcaggctgccggccgcatttcggcgacg
ctggcgcttatctatccaccggggatcggcgtaatcgttcccggcgagcgctgggacgac
aaagcgcgcccgatgcgggactatttcctggccttcgaagagtccttcaatcgattccca
ggcttcaattacgaggtccagggcgtgttccaggaaaggatcgaggggcggatccaattc
cacacatatgtcgtgcgcgagtag
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