Rhodobiaceae bacterium SMS8: RHODOSMS8_01717
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Entry
RHODOSMS8_01717 CDS
T05596
Symbol
tetA
Name
(GenBank) tetracycline resistance protein, class C
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
rbs
Rhodobiaceae bacterium SMS8
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbs02000
]
RHODOSMS8_01717 (tetA)
01504 Antimicrobial resistance genes [BR:
rbs01504
]
RHODOSMS8_01717 (tetA)
Transporters [BR:
rbs02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
RHODOSMS8_01717 (tetA)
Antimicrobial resistance genes [BR:
rbs01504
]
Gene variants
Tetracycline resistance genes
Transporters
RHODOSMS8_01717 (tetA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
MFS_4
Motif
Other DBs
NCBI-ProteinID:
AWZ01252
UniProt:
A0A2Z4UJX0
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All DBs
Position
1728055..1729272
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AA seq
405 aa
AA seq
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MTARKPGRHALAFVLVTILIDTIGFGIIIPVIPELIMELSGEPISAAAGYGGLMLFSFAA
AHFVFAPVMGNLADRFGRRPILLISLLALGVDYLIMAFAPSLFWLFLGRIFAGMFGATFA
TANAYVTDVSPPEKRAQNFGLTGAAWGLGFIIGPVIGGFLGELGPRIPFFAAASIAFINV
AYGFLVLPETLKDKDRRTFDWKRANPVGALAHFRAYPVLLGLAGATILFQLAHDANPAVF
TYFAIHQFGWSEREIGFALGFVGVTVIFSQTVLIRWTVEKFGEVNSAFIGLTVAAVGFAA
LGMATTTWMAYLALIPMALMGLAMPAIRSLMAARVPDNAQGELQGALSSLMGLTMIAAPL
LMTQLFRTFTAEDAPLQLPGAPYFAAAFLMISAALVLSRYARNHS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacgcaaaccgggacgccatgcattggcgtttgtcttagtcacaatcctgatc
gacacgatcggattcggcatcatcattcctgtgatccctgaactgattatggaactgtcc
ggcgagcccatttccgccgccgcaggatatggcggcctgatgctcttctcatttgctgcc
gctcacttcgttttcgcacctgtcatgggaaacctcgcggaccgtttcgggcgccgaccg
atccttctcatatcgctcctggcgcttggcgtcgattatctcatcatggcctttgcccca
tcactcttctggctgtttctggggcgtattttcgcgggcatgttcggggcaaccttcgcc
acagcaaacgcctatgtgacggatgtctccccacccgaaaaacgcgcacaaaattttggt
ctcacaggcgcggcctggggactgggtttcatcatcggaccggttattggcggcttcctg
ggcgaacttggcccacgcattcccttctttgccgctgcgagcatcgcctttatcaatgtc
gcctatggcttcctggttctgcctgaaacattgaaagacaaggaccggcggacttttgat
tggaagcgggcaaatcccgttggcgcccttgcccatttcagagcctatccggtccttctc
gggttggccggcgccaccatcttgtttcagttggcccacgacgccaatccggcagtcttc
acatacttcgctattcaccagttcggctggagcgaacgagagatcggctttgctctgggc
tttgttggggtcaccgttattttcagccaaacagtcctcattcgatggaccgtcgagaaa
ttcggtgaggtaaattcagcctttatcggcttgaccgtcgccgcggtgggttttgctgct
ctcgggatggcaacgacaacatggatggcctacctcgccctcattccgatggcactaatg
ggcctcgccatgcccgctatcagaagccttatggctgcgcgggtcccagataatgctcag
ggagagctgcaaggagcgctctcaagcctcatgggcctgactatgattgcagcgccgttg
ctcatgacgcaactctttcgcactttcactgctgaagatgcgcctcttcagcttcccggc
gcaccctattttgctgcggctttcctcatgatttcagccgctttagtcctctccaggtac
gcccgcaaccattcgtaa
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