Rugosibacter aromaticivorans: PG1C_09575
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Entry
PG1C_09575 CDS
T03689
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu00300
Lysine biosynthesis
rbu01100
Metabolic pathways
rbu01120
Microbial metabolism in diverse environments
rbu01230
Biosynthesis of amino acids
Module
rbu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PG1C_09575
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rbu01002
]
PG1C_09575
Enzymes [BR:
rbu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PG1C_09575
Peptidases and inhibitors [BR:
rbu01002
]
Metallo peptidases
Family M20
PG1C_09575
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AJP48623
UniProt:
A0A0C5JA69
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All DBs
Position
complement(1955229..1956362)
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AA seq
377 aa
AA seq
DB search
MQVLEKVQALIARASITPEDGGCLDLIASWLMPLGFSIERMDQGGVSNLWAKRRGSNPQG
KIICFAGHTDVVPTGPLEKWTSPPFTPEIRDSYLYGRGAADMKSSLAACVVAIERLLARR
AASADSLALLLTSDEEGDAINGTVRVVEALKARGEAIDYCIVGEPTCVDQLGDTVKNGRR
GSLSAKLIVKGVQGHVAYPHLVKNPVHLAAPVLAELVAATWDDGNEDFPPTSLQISNAHA
GTGAGNVSPGTFELLFNFRFSTASTAEGLQARVHDILDRHGLAYDIHWTLGAKPFLTPRG
QLCLALSESITRVTGITPVLATTGGTSDGRFIADICSQVVEFGPTNDSIHKIDERIAIAE
LEYLAQIYEGTFDRLLT
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcttgagaaagttcaggcgctgattgcccgcgcttctattaccccggaagat
ggaggttgtcttgatctgattgcctcatggttaatgcctctcggattttctatcgagcga
atggatcagggcggagtctctaatctatgggccaagcgccgtggcagtaatcctcaaggc
aaaattatttgctttgctggtcacactgatgtggtaccgacagggccgcttgaaaagtgg
acgtctcccccgttcacccctgagattcgagacagctatctttatggacgtggagcagcg
gatatgaagagttcgcttgccgcgtgtgtcgttgctatcgaaagattactggcgcgccgt
gctgccagcgccgactctttggccttgctgctgacttcagacgaagaaggcgatgcaatc
aatggcactgtgcgggttgttgaggcgctcaaggcgcgaggagaggccatcgattactgt
attgttggcgaaccaacctgtgttgatcaactgggtgacaccgtcaaaaatggtcggcgt
ggatcgctctctgccaaacttatcgtaaaaggtgtgcaagggcatgtagcctatccacat
ctcgtgaaaaaccccgtgcacctggccgctcccgtgttggctgagcttgttgccgctaca
tgggatgatggcaacgaagattttccgccaaccagtttgcagatttccaatgcgcatgcc
ggtaccggcgcagggaacgtgagcccgggcacttttgagctattgttcaactttcgcttt
tctaccgccagcacggcagaaggcttgcaagcccgtgtgcatgacatactcgatcggcat
ggtctggcatatgacatccactggacgcttggcgccaaaccttttctcaccccacgtggc
caactgtgtttggcgttatcagaatccattacgcgggtgaccgggatcaccccggtgctt
gcgacaaccggtggcacatctgacggccgattcattgcggatatatgcagccaggttgtc
gagttcgggccaaccaatgacagtattcacaagatcgacgaacgtattgccattgcagag
cttgagtacttagcccagatctatgaaggtacctttgatcggttgctgacatga
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