Rouxiella chamberiensis: O1V66_03855
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Entry
O1V66_03855 CDS
T08677
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rcb
Rouxiella chamberiensis
Pathway
rcb00540
Lipopolysaccharide biosynthesis
rcb01100
Metabolic pathways
rcb01250
Biosynthesis of nucleotide sugars
Module
rcb_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
O1V66_03855 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rcb01005
]
O1V66_03855 (rfaD)
Enzymes [BR:
rcb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
O1V66_03855 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
rcb01005
]
Core region
O1V66_03855 (rfaD)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
WAT01856
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All DBs
Position
805300..806280
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AA seq
326 aa
AA seq
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MILLTGAAGFIGSNVLLALNKAGINDVVICDTLGRGEKWRNIIDCEFSDFIPLDNLEAWL
EKSPELDAVIHLGAKSSTTAVDADEVLVNNVSRSLKLWQFCARQGVTFIYASSSSTYGDG
SRGFKDHQSPRFLNQLNPQNLYSWSKNIFDLRVARDVENPEVKTPPHWYGLKLFNVYGPG
EFRAGTLKSSVGKICYSVLQDKPVTLFKSASPEYDDGEQSRDFIYIDDVTEVIKWLLTHK
PKSGLYNVGTGESTTFLTIAQTAFELSRKSQKINFAPTPDIFKNSTQDFTQADITKIRAA
GYTHNFTTLREGMAKYLHYLRQRVQG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgattttattaaccggtgcggcaggatttatcggctctaatgtattattggcgttgaat
aaagccggcataaatgatgtggtaatttgcgacacgctggggcgcggtgaaaaatggcga
aatattatcgactgtgaattcagcgattttattcctctcgataaccttgaagcttggctg
gaaaaaagccccgaactcgatgccgttattcatcttggcgcgaaatcctccacgaccgcc
gtcgatgccgatgaagttctggtcaataatgtctcgcgttcgctcaaactgtggcaattt
tgcgccagacagggcgtcacttttatttacgcctcctcttcgtcaacttatggcgatgga
tcccgcggcttcaaagaccatcagtccccgcgctttctcaaccagctcaacccgcagaat
ctttatagctggagcaagaatatctttgatctgcgggtggcgcgcgacgtcgaaaatccc
gaggtcaagaccccgcctcactggtatggcttaaaactatttaatgtctacgggccgggt
gaatttcgtgccgggacattgaagagttcagtcggcaaaatttgttattccgtcttgcag
gataaacccgtgactctgtttaagtcagcctcaccggaatatgatgacggcgagcagtcg
cgagattttatttatatcgatgacgtcacagaagtgatcaagtggttattaacccataaa
cccaagtcgggattatataatgtgggcaccggtgaatcgacgacctttctgaccattgcc
cagaccgcttttgaactctctcgtaaaagccagaaaattaatttcgcccctactcccgat
attttcaaaaacagcactcaagattttacccaggccgatatcaccaaaatacgtgcggcg
ggttatacccataacttcaccaccttgcgcgaaggaatggccaaatatctccattatcta
cgccaaagagtgcagggctaa
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