Ruminococcus champanellensis: RUM_03730
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Entry
RUM_03730 CDS
T02600
Name
(GenBank) SSU ribosomal protein S12P methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rch03009
]
RUM_03730
Enzymes [BR:
rch01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RUM_03730
Ribosome biogenesis [BR:
rch03009
]
Prokaryotic type
ribosomal protein modification factors
RUM_03730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF6718
TRAM
Motif
Other DBs
NCBI-ProteinID:
CBL16611
UniProt:
D4LAG6
LinkDB
All DBs
Position
complement(410222..411565)
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AA seq
447 aa
AA seq
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MSIKVGMVSLGCAKNLVDSERMLHLIRQRGYELVTEPGDADVVVVNTCGFIQSAKEEAID
TILELCQLKAEGSIRKIIMTGCLAERYRQEAADEFPEVDAVIGIGDQGQIIDVIDHVLAN
ERMVHFCSKLDVPMSGRRVLSTLPFFAYLKIAEGCNNCCTYCAIPMIRGGFRSVPMEDVL
EEARWLTEHGVTELTVIAQDTTRYGEDLYGESRLPELLEQLCRIQGIRWIRVLYCYPERI
TDKLLEVMAREEKLVKYLDIPIQHCNGDILRRMNRQGDAGTLAALLNKIRQMIPDITLRT
TLITGFPGETEAQFTELAEFIQAQRFDRLGCFAYSQEEGTRAAEFPDQVPEDVRQHRADI
LMEQQQLIVEEKNNARLGQVCTAVIEGYDRWAECWFGRTAADAPDIDGKVFIRSETPLHI
GDYVTVRLDEVLDYDFVGEVVTDESAQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccattaaagtgggaatggtatcccttggctgtgccaagaatctggtggattcggag
cgtatgctccatctgatccggcagcggggctatgaactggtcaccgagccgggggatgcg
gacgtggtggtggtaaacacctgcggctttatccagtccgccaaggaggaagcaatcgac
acgatcctggagctgtgccagctaaaggcggagggctccatccggaagatcattatgacc
ggatgtctggcagagcgctaccggcaggaggcagcggacgaattcccggaggtggacgct
gtaataggcatcggggatcaggggcagatcattgacgtgatcgaccatgtgcttgccaac
gagcggatggtgcatttctgctccaagctggatgtgcccatgtccggcagacgggtgctg
tccaccctgcccttctttgcgtatctgaaaatcgcagagggctgcaacaactgctgtacc
tactgcgccatccccatgatccggggcggcttccgctccgtgcccatggaggatgtgctg
gaggaggccaggtggctgacggagcatggggtcacggagctgaccgtcattgcccaggat
accacccggtacggggaggatctgtacggggaaagccgcctgccggagctgctggagcag
ctatgccggatccagggcatccgctggatccgggtgctgtactgctatccggagcggatc
actgataagctgctggaggtcatggcacgggaggaaaagctggtcaagtatctggatatc
cccatccagcactgcaacggggacattctccggcgcatgaaccggcagggggatgcaggc
accctggcagccctgctgaacaagatccggcagatgatcccggatatcaccctgcgaacc
acgctgattaccggcttccccggagaaacggaagcccagttcacggagcttgcagaattt
atccaggcgcagcggttcgatcggctgggctgctttgcctactcccaggaggagggcacc
agggcggcggaatttccggatcaggtgccggaggatgtgcggcagcaccgggcggacatt
ctcatggagcagcagcagctgatcgtggaggaaaagaacaacgccagactggggcaggta
tgcaccgccgtcatcgagggctacgaccggtgggcggaatgctggttcggacgcacggcg
gcggatgcgccggacattgacggcaaggtctttatccgcagcgagaccccgctgcatatc
ggggactacgttaccgtccggctggacgaggtgctggattacgattttgtgggagaggtg
gtcacggatgaatctgcccaataa
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