Ruminococcus champanellensis: RUM_23920
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Entry
RUM_23920 CDS
T02600
Name
(GenBank) Thiamine biosynthesis ATP pyrophosphatase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00730
Thiamine metabolism
rch01100
Metabolic pathways
rch01240
Biosynthesis of cofactors
rch04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RUM_23920
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
RUM_23920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rch03016
]
RUM_23920
Enzymes [BR:
rch01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
RUM_23920
Transfer RNA biogenesis [BR:
rch03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RUM_23920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
CBL18380
UniProt:
D4LFI5
LinkDB
All DBs
Position
complement(2543384..2544559)
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AA seq
391 aa
AA seq
DB search
MKEIILAKYGEMALKGLNKNGFEDILLKNIRRRLKPLGSFTYAKAQSTIYITPAEEDVLE
DAMERLGKVFGIAALCRALVCEKRFDSVAERAPEYLEEVLSGARTFKVEAKRSDKAFPMK
SPEICRELGGILLDKFPHLTVDVNHPEVIVTVEIRDTNAYVHADRRPGAGGLPVGSSGRA
LLLLSGGIDSPVAGYMMAKRGICVSAIHFISPPYTSERALLKVETLAEKIVPYCGSMAFF
CVPFTKIQETIKDQCPEELFTVIMRRLMMEVAQQIADREGCLALITGESVGQVASQTMQA
LCATDAVCRMPVFRPLIGMDKTEIIAISRKIDTYDTSIEPYEDCCTVFTPRHPKVRPRLE
DVERAQGAFDFTELVTEAVTNTTMKIIRTDF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatcatacttgcaaaatacggcgaaatggcgctgaagggactgaacaagaac
ggctttgaggatatcctcctcaagaacatccgccggcggctcaagcccctgggcagcttt
acctacgccaaggcacagtccaccatctacatcaccccggcggaggaggatgtgctggag
gacgccatggaacggctggggaaggtgttcggcatcgccgccctgtgccgggcgctggtg
tgcgaaaagcgctttgactccgtggcggagcgtgcgccggaatacctggaggaggtgctg
tccggtgcccgtacctttaaggtggaggcaaagcggtcggacaaggcgtttcccatgaaa
tccccggagatctgccgggagctgggaggcatcctgctggacaagttcccccatctgacc
gtggacgtgaaccatccggaggtgatcgttacggtggagatccgggacaccaatgcctat
gtgcatgcggatcgccgtcccggtgccgggggtttgccggtgggcagctccggtcgggcg
ttgctgttgctgtccgggggcatcgacagcccggtggcagggtatatgatggcgaagcgg
ggcatctgcgtcagcgccattcattttatcagccctccttacacctccgagcgtgccctg
ctgaaggtggaaaccctggcggagaagatcgtgccctactgcggctccatggcgttcttc
tgtgtgccctttaccaaaatccaggaaaccattaaggatcagtgcccggaggagctgttc
accgttatcatgcggcggcttatgatggaggtggcacagcagatcgcagaccgggaaggg
tgccttgccctcattaccggggaaagcgtggggcaggtggcaagtcagaccatgcaggcg
ctttgcgcaacggatgcggtgtgccggatgcctgtgttccgtcccctgatcggcatggac
aagacggagatcattgccatttccaggaagatcgacacctacgacacctccatcgaaccc
tacgaggactgctgcaccgtattcaccccccggcaccccaaggtgcgtccccgtctggag
gatgtggaacgggcacagggggcattcgactttacggagctggttacagaggctgtaacc
aatacgaccatgaagatcattcgtacagatttttga
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