Methanocella arvoryzae: LRC354
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Entry
LRC354 CDS
T00526
Symbol
rpoB1
Name
(GenBank) DNA-directed RNA polymerase, subunit B1
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
rci
Methanocella arvoryzae
Pathway
rci03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LRC354 (rpoB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rci03021
]
LRC354 (rpoB1)
Enzymes [BR:
rci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LRC354 (rpoB1)
Transcription machinery [BR:
rci03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
LRC354 (rpoB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
DUF772
Motif
Other DBs
NCBI-ProteinID:
CAJ35322
UniProt:
Q0W8H1
LinkDB
All DBs
Position
complement(2930338..2931888)
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AA seq
516 aa
AA seq
DB search
MLDRTVLSKAYFTRKKIAQHHIDSFNVFLEQGLQKVIDEQGYIETDIEDIEHNIEPVKVK
LGKIRVGNPVVREADGSVEPLYPTEARLRNITYAAEIFLEMAIVRGEIEGDFIEVNIGQM
PIMIGSNKCNLARVTPDEWVKHGEDPVDPGGYFIVNGTERVIMTLEDLAPNKIMVEYDDR
YGDQIEVAKVFSQRRGYRALVIVERGRKSILEVSFPSISGRLNLVMLMRALGLETDQEIV
NAVSDDPEIQKFMLENLDEAEADTSESAMEKIGKRVAAGQAKDYQRKRAFYVIDRYLLPH
LNPENFERLGPDDPKLAESRITKAYFLGRMAEACCELALRRRAPDDKDHYSNKRLKLAGD
LMEDLFRVSFNRLTRDIKYQLERANMRNRELYMITAVRADVLTERLIHPLATGNWVGGRT
GVSQLLDRIDYMAMLSHLRRVISPLSRAQPHFEARDLHATQWGRICPSETPEGPNCGLVK
NFAMSVELSTGVEDEESIKKIMLEAGVQPLRRGTVE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgttagaccgaactgtactaagtaaagcgtattttacccgtaaaaaaattgcgcagcat
catattgactcttttaacgtttttctggaacagggcctgcagaaagtcattgacgagcag
ggatacatcgagacggacatcgaggacatcgagcacaacatcgagccggtaaaggtcaag
ctgggtaagatccgcgtgggcaacccggtggtcagggaagctgacggttccgtagagccg
ctctacccgaccgaggccaggctgagaaacatcacctacgcagccgagatcttcctcgag
atggctatcgtccgcggcgagatcgagggtgactttatagaggtcaacatcggccagatg
ccgatcatgatcggcagcaacaagtgcaacctcgcccgggttacgccggacgagtgggtg
aagcacggcgaagacccggtcgaccccggcggatacttcatcgtcaacggtaccgagcgt
gtcatcatgacccttgaagacctcgcccccaacaagatcatggtcgagtacgacgaccgc
tacggcgaccagatcgaggtggccaaggtgttctcccagcgcaggggctacagggctctc
gtgatcgtggagaggggccgcaagtcgatcctggaggtctccttcccgtctatctcgggc
cgcctgaacctcgtcatgctgatgagggcgctgggcctggagactgaccaggagatcgtc
aacgcggtctcggacgacccggagatccagaagttcatgctggagaacctggatgaggca
gaggccgacacttcggaatcggcaatggagaagatcggcaagcgcgtcgcagccggccag
gcgaaggactaccagaggaagagggcgttctacgtcatcgacaggtaccttctaccccac
ctgaaccccgagaacttcgagcgtctcggaccggatgacccgaagctggcagagtcccgg
atcaccaaggcttacttcctgggcaggatggccgaagcctgctgtgagctggctctgagg
agaagggctccggatgacaaggaccactactctaacaagaggctcaagctcgccggcgac
ctgatggaagacctgttcagggtctctttcaacaggcttaccagagacatcaagtaccag
ctcgagagggccaacatgcgtaacagagagctgtacatgatcacggcagtcagggcagac
gtcctgaccgagaggctcatccacccgctggccacgggcaactgggtcggcggcaggacc
ggcgtgtcccagcttctggacaggatcgactacatggccatgctgtcccacttacgccgc
gtcatatccccgctgtccagggctcagccgcacttcgaggctcgtgaccttcacgctacc
cagtggggcagaatctgcccctcggagacccctgaaggaccgaactgcggtctggtgaag
aactttgccatgtcggtggaactctcgacgggcgtagaggacgaggaatcgatcaagaaa
atcatgcttgaagctggcgttcagcccttaaggaggggtacagttgaataa
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