Methanocella arvoryzae: RCIX1611
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Entry
RCIX1611 CDS
T00526
Symbol
nifD
Name
(GenBank) nitrogenase molybdenum-iron protein, subunit alpha (dinitrogenase)
KO
K02586
nitrogenase molybdenum-iron protein alpha chain [EC:
1.18.6.1
]
Organism
rci
Methanocella arvoryzae
Pathway
rci00625
Chloroalkane and chloroalkene degradation
rci00910
Nitrogen metabolism
rci01100
Metabolic pathways
rci01120
Microbial metabolism in diverse environments
Module
rci_M00175
Nitrogen fixation, nitrogen => ammonia
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RCIX1611 (nifD)
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
RCIX1611 (nifD)
Enzymes [BR:
rci01000
]
1. Oxidoreductases
1.18 Acting on iron-sulfur proteins as donors
1.18.6 With dinitrogen as acceptor
1.18.6.1 nitrogenase
RCIX1611 (nifD)
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Gene cluster
GFIT
Motif
Pfam:
Oxidored_nitro
YjeF_N
SpoVAE
CbiK
Motif
Other DBs
NCBI-ProteinID:
CAJ36853
UniProt:
Q0W440
LinkDB
All DBs
Position
complement(1389661..1391268)
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AA seq
535 aa
AA seq
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MAITDKKLEDLLATYPDIVRKNRKKHILIKNSGEACQQIEANTRTIPGIISQRGCCFAGC
KGVVVGPIKDMVHIVHGPVGCAYYSWGTRRNKAKADDTTPRENIYSTLCFTTDMQEPDIV
FGGEKKLAKMIDEVVEMFHPRAISISATCPIGLIGDDIGAVAKAAQERHGIQVVAFNCEG
YKGVSQSAGHHIANNNLMEHVIGKGAQRKPGSYVINLLGEYNIGGDGWELERILQEIGYT
VNCVLTGDSSYVDIRGLHLADLNLVQCHRSINYIAEMMETKYGMPWLKVNFIGVDATAKS
LREIAQCFGDEALVQKTEEVIAREMAIVKPVMEHYRKLLQGKTAFGFVGGSRSHHYQYLL
RDLGMEMIVAGYEFAHRDDYEGRQVIPTIKSDADSKNIPELHLEPDKERYQEANVYLNMS
KEQFEELKKKVPLSYYEGMNTSMKDGEVIIDDINHHEFERLVRELKPDLILTGVRDKYIA
HKLGVPSRQLHSYDYTGPYAGFNGAMTFAKEVANAVSTPAWKLVTAPWEQEEIKE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggctatcacagacaagaaactcgaggacctgctggcgacttaccccgatatcgtcagg
aagaaccggaagaagcatatcctgatcaagaactctggcgaagcctgccagcagatcgag
gccaacaccagaaccatacccggtatcatctcccagcgaggctgctgttttgcaggctgt
aaaggcgtggtggtcgggccgatcaaggacatggtccacatcgtccacggcccggtaggc
tgcgcgtactactcgtggggcacccggaggaacaaggcgaaggcggacgacactacgccc
agggagaacatctactccaccctctgcttcaccactgacatgcaggagccggacatcgtg
ttcggcggggagaagaagctggcgaagatgatcgacgaagtggtcgagatgttccacccg
agggccatctccatcagcgccacctgcccgataggattgataggcgacgatatcggcgcc
gtggcaaaggccgcacaggagcggcacggcatccaggtggtggccttcaactgcgaaggc
tacaagggtgtcagccagtctgccggccaccatatagccaacaacaacctcatggagcac
gtgatcggcaaaggcgcccagcgaaagcccgggagctacgtcatcaacctgctcggagag
tacaacatcggaggcgacggctgggagctggagcgcatactgcaagagatcggctacacc
gtgaactgcgtgctgaccggcgacagcagctacgtggatatcaggggtctccatttagcg
gacctgaacctggtccagtgccaccgctctataaactacatcgcggagatgatggagact
aagtacggcatgccgtggctgaaggtcaacttcatcggggtggatgcgaccgcaaaatcc
ctcagagagatagcccagtgcttcggggacgaggcgcttgtacagaagaccgaggaagtc
atcgccagagagatggccatagtgaagcccgtaatggagcactaccgcaagctgctccag
ggcaagactgccttcgggttcgtcggaggctcgaggagccaccactaccagtacctgctc
cgcgatttaggcatggagatgatcgtggcggggtacgagttcgcccaccgggacgactat
gaaggccggcaggtcatccccacgatcaagagcgacgcggactccaaaaacatcccggaa
ctgcatttagagccggacaaggagcgttaccaggaggcgaacgtctacctgaacatgtcg
aaggagcagttcgaggagctgaagaaaaaggtccctctcagctactacgagggcatgaac
acgtccatgaaggacggagaggtcatcatcgacgacatcaaccaccacgagttcgaacgt
ctcgtccgggagctgaagccggacttaatacttacgggtgtcagagacaagtacatcgcc
cacaagctcggcgtcccgtcgagacagctgcactcgtacgactacaccggcccatacgca
ggcttcaacggtgcgatgaccttcgcgaaagaggtagcgaacgcggtgtcgacgccggcg
tggaagctggtgacggccccgtgggaacaagaagagataaaggagtga
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