Methanocella arvoryzae: RCIX2005
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Entry
RCIX2005 CDS
T00526
Symbol
murD
Name
(GenBank) putative UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K21612
coenzyme F430 synthetase [EC:
6.4.1.9
]
Organism
rci
Methanocella arvoryzae
Pathway
rci00860
Porphyrin metabolism
rci01100
Metabolic pathways
rci01110
Biosynthesis of secondary metabolites
rci01120
Microbial metabolism in diverse environments
rci01240
Biosynthesis of cofactors
Module
rci_M00836
Coenzyme F430 biosynthesis, sirohydrochlorin => coenzyme F430
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RCIX2005 (murD)
Enzymes [BR:
rci01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.9 coenzyme F430 synthetase
RCIX2005 (murD)
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Motif
Pfam:
Mur_ligase_M
DUF1069
CbiA
Motif
Other DBs
NCBI-ProteinID:
CAJ37160
UniProt:
Q0W383
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All DBs
Position
1071715..1072989
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AA seq
424 aa
AA seq
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MELNASRIAILDVNHGGLVLARELQSLGYDTFAVDVYGSGKESEDIRIVQADEAPAFDML
VAPVHMAPYKLLYDAVRRGMPVLTHHRMAGMLIEATGRLKGVKSVEVTGTYGKTTACALL
GRMLQAKGEHVLVHASMGLTFDGMPVGERLSITPANMLRALDCAKKAGLHPTACVFEVSL
GGCGTADVGIITTLDRDYPVAGGTKRSYMAKMQMIEHAKPRSTIVHQATYRLTGGRDEIT
FGEGGDLFYGKAGMIEGPLLEGETIYPAFAPGLDLESYGDPALCAAAAALSMGTSPEAVS
DALAGFDGIPGRMKRGIIQGRELLDNSCSGLSIDGVLRALEKSGGHPGRKVLVLGEEKYN
VCEGLDPAEAARIAEAWAGEVVLVGDRLLSVSGVHAASLKEGLREALSRTAPGDMIISCV
KTWR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaacgcatcccgcatcgccatcctggacgtgaaccacggagggctggtcctg
gccagagagctgcaaagcctgggctacgacactttcgcggtagacgtttatggatcgggt
aaagaaagcgaagatatcaggatagtgcaggctgacgaagccccggctttcgacatgctc
gtcgcgcctgtgcacatggccccctataagctgctctacgatgcggtgcggcgaggcatg
ccggtcctcacccatcatcgcatggcgggcatgctgatcgaagctaccggacggctgaag
ggcgtgaaaagcgtggaggtcacgggcacgtatggcaagaccactgcctgtgcgctgctg
ggaagaatgctgcaggccaaaggagagcatgtgctggtgcacgccagcatggggctaacc
tttgatggcatgccagtgggcgaaaggctgagcattacgccggcgaacatgctccgggcg
cttgattgcgccaaaaaagcgggcctgcacccgacagcctgcgtgttcgaggtctctctg
ggcggctgcggaaccgcagacgtcggaatcatcaccacgctggacagggactaccccgtc
gccggagggacaaaacgatcatatatggctaaaatgcagatgatagagcacgccaaaccc
cgtagcactatcgtccaccaggcaacctacaggctgaccggcgggcgtgatgagatcacc
ttcggagaaggcggagatctcttctacgggaaagccgggatgatcgagggcccgctgctg
gaaggcgagaccatatatccagcatttgcgccggggctggaccttgaatcgtacggagac
ccggccctatgcgctgcggctgccgccctcagtatgggcacatcaccggaagcagtgtcc
gacgcgctggcgggcttcgacggcatcccgggcaggatgaagcgcggcatcatccagggc
agggaactgctggacaactcctgctcgggcctctccatcgacggagtactcagggctctg
gaaaagagcggcggccatccgggcagaaaagtgctggtgctgggcgaggagaagtataac
gtctgcgaaggcctggaccctgcggaggctgcccgaattgccgaagcctgggccggagaa
gtcgtgctggtgggcgatcgactgctatcggtcagcggagtgcacgcagccagcctgaaa
gagggacttcgggaagcgctgagcaggactgcgcccggagacatgatcatatcctgcgtg
aagacatggaggtag
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