Riemerella columbina: NYR17_03080
Help
Entry
NYR17_03080 CDS
T09247
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rcl
Riemerella columbina
Pathway
rcl00260
Glycine, serine and threonine metabolism
rcl00630
Glyoxylate and dicarboxylate metabolism
rcl00785
Lipoic acid metabolism
rcl01100
Metabolic pathways
rcl01110
Biosynthesis of secondary metabolites
rcl01200
Carbon metabolism
Module
rcl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NYR17_03080 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NYR17_03080 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NYR17_03080 (gcvP)
Enzymes [BR:
rcl01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NYR17_03080 (gcvP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF1297
SepSecS
Motif
Other DBs
NCBI-ProteinID:
WKS95737
LinkDB
All DBs
Position
complement(642376..645234)
Genome browser
AA seq
952 aa
AA seq
DB search
MNTQAFVNRHISINEEDQKAMLQKIGVASMEELISQTIPAEIRTEKELSISEPLSEYEML
LHSKELAAKNHLFDTYIGFGYYNTILPSPIQRNIFENPSWYTAYTPYQAEIAQGRLEALL
NFQTVAAELSGFPLSNASLLDEGTAAAEAMHMFFESRTKEQKKNDACHFFVSDLVFPQTI
AVLKTKAEGLGITIVIGNHETQAIDEQFFGALLQYPGKNGAVIDYTDTIAQYKEKNLQVA
VACDPLALVKLKSPAAMGADCAVGTTQRFGIPMGYGGPHAAFFTCKEVYKRDIPGRIIGV
SQDMYGKRALRMALQTREQHIKREKATSNICTAQVLLAVMAGMYCVYHGPQGLANIANRI
HYKANAVAEALKILGYDVVEEPTFDTVKIQLSEEEKQALMMLMRGQNINLNYFTEGIVSL
SIDETSIEPKLQKLVDAFANFKAKQSFKINIKEENTIPQSLLRTDEILKEEVFNKYHTET
ELMRYIKRLERKDLSLTQSMISLGSCTMKLNAATEMLPLSWAEWGAVHPFVPTEQAGGYQ
LMIKELEKDLAEITGFAGTSLQPNSGAQGEYAGLMVIREYHKSKGEGHRNIILIPQSAHG
TNPASAVMAGMKVVVVKNLENGEIDFEDLKAKAEQHSENLSAVMITYPSTYGFFDQNIKA
ITQLIHDHGGQVYMDGANMNAQVGYTSPGIIGADVCHLNLHKTFAIPHGGGGPGVGPICV
AEHLVPFLPSNPNIKVGSAEAIDAISSAPYGSALVQNISYAYIKMLGTEGLKKATEHAIL
NANYLKDVLKEHYPILYSNQHGRVAHECIVDFRPFKALGIEVADIAKRLMDYGFHAPTVS
FPVAGTLMIEPTESESKEELDRFAEALISIKKEIDEIAEGKADAKNNVLKNAPHTEQVVI
SDAWDKPYSREKAAYPLDWVREHKFFASVSRVDEAYGDRNLVCTCEPIESYM
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacaagcgtttgttaatcgccacattagtatcaatgaagaagaccagaaggct
atgcttcaaaaaataggcgttgcctctatggaagagctcatctctcagaccattcctgca
gaaatacggacagaaaaagaactaagcatttcggaacctttatcagagtacgaaatgctt
ttgcattctaaggagctggcagccaaaaatcatttgtttgacacttatattggcttcggt
tattataacaccatactcccttctcccatccaaagaaatatttttgaaaatcccagctgg
tacacggcttatacaccttaccaagccgaaatagcccaagggagattagaggctttgctc
aacttccaaacggtagcggcagaactctctggatttccgctctctaacgcttctctttta
gatgaaggtaccgccgctgcagaagctatgcatatgttttttgaaagccgaactaaggag
caaaaaaagaacgatgcatgccatttcttcgtttcagatttggtattcccgcagaccatt
gccgtattaaaaactaaggcggaaggcttgggcatcaccatcgttatcggcaaccacgaa
acgcaagccatagatgagcagttttttggggctttattgcaatacccagggaaaaacggc
gccgtgatagactataccgataccattgcgcaatacaaagagaaaaacctgcaagtggct
gtcgcttgtgatcctttggcattggttaaattaaaatcgcctgccgctatgggggcagat
tgcgctgtgggaactacacaacgcttcggtattcctatgggctatggcggacctcacgcg
gcatttttcacttgtaaagaagtttataaaagagatattccagggcgaattattggggtt
tcgcaagatatgtacggcaaaagagccctcagaatggcgctccaaaccagagaacagcac
atcaagagagaaaaagccacttctaacatctgtacagcgcaagttttattagccgtaatg
gcggggatgtactgcgtttatcacggtcctcagggattagccaatattgctaatcgcatt
cattataaagccaatgccgtagcagaagcacttaaaattttaggctatgatgtggtggaa
gaaccaacttttgatacggttaaaatccaactcagtgaagaggaaaaacaagccttaatg
atgctgatgagaggtcaaaatatcaaccttaattattttacagaagggattgtcagcctt
tccatcgatgaaacatccattgaacctaaactccaaaaattggtagatgcttttgctaat
ttcaaagccaaacaaagctttaaaatcaacattaaagaagaaaataccattcctcaatct
ctattgagaacagatgaaattcttaaagaggaagttttcaataaataccatacggaaaca
gaactgatgcgctacatcaagcgtttggaaagaaaggatttatccctcacccaatcgatg
atttccttaggttcttgtacgatgaagctcaatgcagctacagaaatgttgcctttatct
tgggcagaatggggcgctgtgcatcctttcgtgccaacagagcaagcgggcggttaccaa
ctgatgattaaagaattagagaaagacttagccgaaattacaggctttgcggggacttct
ctacagcctaactctggcgcacaaggcgaatatgcagggctaatggtcattagagaatac
cataaatctaaaggcgaagggcatagaaatatcatccttataccacagtcggcgcacggc
actaacccagcttctgcagtgatggcaggaatgaaagtggtggtggtaaaaaatcttgaa
aacggagaaatagactttgaagatttaaaagccaaagcagagcaacacagcgaaaatctg
tctgcggttatgattacctacccctctacttatggattttttgatcaaaatatcaaagcc
attacccagctgatccacgaccacggcggacaagtctatatggatggcgccaatatgaac
gctcaagtaggctacaccagtcctggtatcatcggtgctgatgtttgccacttgaattta
cacaaaacctttgctattcctcacggcggcggcggtcctggtgtaggtcccatctgcgta
gccgagcatttggttccgtttttaccttctaaccctaatattaaggtaggcagtgccgaa
gccatcgatgcgatttcttccgcaccatacggctctgcattggtacagaacatttcttat
gcctacatcaaaatgttagggaccgaggggcttaaaaaagcgacagaacacgccatatta
aatgctaattatttaaaagatgtgctaaaagagcattaccctattctctactctaaccag
catgggcgcgtggctcacgagtgtattgtagactttagaccattcaaagccttgggtatt
gaggtggcagacatcgccaaacgattgatggactacggcttccacgcacctacggtgagt
ttccctgtggcaggcaccttgatgattgagcctacggaatccgaaagtaaagaagaatta
gatcgctttgccgaagcattaatttccatcaaaaaagagattgatgaaattgcagaaggt
aaagccgatgctaaaaataatgttctcaaaaatgcaccacacacagagcaagtggtcatt
tctgatgcttgggataagccttatagccgagaaaaagccgcctaccctctggattgggtg
agagagcataaattcttcgcttctgtatctcgcgtagatgaagcctatggcgatagaaat
ttggtctgcacctgcgaaccgatagaaagttatatgtaa
DBGET
integrated database retrieval system
