Riemerella columbina: NYR17_05625
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Entry
NYR17_05625 CDS
T09247
Symbol
ppk1
Name
(GenBank) polyphosphate kinase 1
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rcl
Riemerella columbina
Pathway
rcl00190
Oxidative phosphorylation
rcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
NYR17_05625 (ppk1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NYR17_05625 (ppk1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcl03019
]
NYR17_05625 (ppk1)
Enzymes [BR:
rcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
NYR17_05625 (ppk1)
Messenger RNA biogenesis [BR:
rcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NYR17_05625 (ppk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
PTPS_related
Kinesin
KATNA1_MIT
FCSD_central
Motif
Other DBs
NCBI-ProteinID:
WKS94425
LinkDB
All DBs
Position
complement(1181460..1183523)
Genome browser
AA seq
687 aa
AA seq
DB search
MPQFNPRDITWLAFNERVMQEAMDPKVPLHLRIKFLGIFSNNLDEFFRVRVAGLKRTLDF
KAKHRSTSFFEDPQKILDKINKIVIRQQNHFNTAWQQIQKEMAEERIFIKTARDLSEAQK
KFVEQYFDEEVEANVIPILLREDTPMPYLRDKSLYLGIAMRKKSWQYESRYAIIEVPSKL
NGRFVLLPSEKDGTCVMLLEDVITYNLPHIFSYFGYNVFEAHAFKVTKDAEFDLDNDIKT
TLADKIKKGVKSRRKGKPTRFVFDQDMDKALLELLIRKLNLSKKDSIIPGQKIHNFKHFM
DFPNVFKAYQTPIERTSFLHPHFVGRQRITEVITKKDVLLTFPYHSYMPVIDLLREAAMD
PDVKSIQITAYRLASNSKIANALINAARNGKEVTVMIELRARFDEEANLKWKEKLELEGI
KILVGIPDKKVHAKLCVIKKRADNKTIQYGFVSTGNFNEKTARVYGDHLLMTSNRAIMAD
INKVFNYFRKPTLDPVAALKNCKTLMVCPHFMREKIEQHIDREIAEAKAGRKAKIILKVN
SLSDKELIKKLYQAAEAGVEIQAIVRGIFCAVQQKKFKKPIHAISIVDEYLEHARVMYFY
NKGSEDVYISSADWMTRNLDYRVEAAVKITAQELKQELIDLLHIQLKDNVKARILDNEMK
NHYVKGSKKEKIRSQIEIYHYLKNKTY
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgccacagtttaaccccagagatatcacttggttagcctttaacgaaagggtcatgcaa
gaagcgatggatcccaaagtgcccctccacctcagaatcaaatttttaggtattttttct
aataacttagacgaattttttagagtgcgcgtggctggacttaaaagaactttggacttt
aaagccaaacaccgtagcacttctttttttgaagaccctcaaaaaatactggataaaatt
aacaaaatcgttattagacaacaaaaccacttcaacaccgcttggcaacagatccaaaaa
gagatggcggaagagcgcattttcataaaaaccgctcgtgacctctcggaagcgcaaaaa
aagtttgtagagcaatattttgatgaagaagtggaagccaatgtcattcccattctacta
agagaagacacaccaatgccctatttaagggataaaagcctctatttaggcatcgcgatg
cgaaaaaaatcttggcaatacgagagccgctatgccattatagaagtaccctcaaaactc
aacggacggtttgtgctcttgccctcggagaaggacggaacttgcgtaatgcttttagaa
gatgtgatcacttataacttgcctcatattttttcttatttcggttataatgtctttgaa
gcccacgcttttaaggtgaccaaagatgccgagtttgaccttgataacgatataaaaacc
acgctggcagacaaaattaaaaaaggagtaaaaagccgcagaaaaggcaaacccacgcgc
tttgtttttgaccaagatatggacaaagccctattagaactcttgattaggaaactcaat
ctgagcaaaaaagatagcattatccctgggcagaaaatccataattttaaacactttatg
gacttccccaatgtttttaaagcctaccaaacgcccatagaacggacttcgtttttacat
cctcattttgtagggcgacagcgcatcacggaggtcattaccaaaaaagatgtattgctc
acttttccgtaccacagctatatgcccgtgatagacctactgcgagaagcagcgatggac
ccagatgtgaaatccatccaaattaccgcttaccgcttggcttctaactccaaaattgcc
aatgccctgattaacgccgcgaggaacggcaaagaggtaaccgtgatgatagagctgagg
gctcgttttgatgaagaagccaacctaaaatggaaagaaaaactggagttagaaggcatc
aaaatactggtgggcattcctgataaaaaggtgcacgccaagctctgcgtaatcaaaaaa
cgcgctgataataagaccattcagtatggttttgtgagcacagggaacttcaacgagaaa
accgcccgtgtctatggcgaccacctcctgatgaccagcaatcgtgccattatggctgat
attaacaaggtgtttaattatttccgaaagccgaccttggaccctgtagcagccctcaaa
aattgcaaaaccctgatggtctgtccgcactttatgcgagagaaaatagaacagcatatc
gatagggaaatagcggaagccaaggcagggcgaaaagccaaaatcatcttaaaagtcaac
tccttgagtgataaagaactcatcaaaaaactctaccaagcggcagaagcgggcgtggaa
attcaagccattgtgcggggaattttctgcgctgtacaacagaaaaaattcaagaaacca
atacacgctatcagcattgttgatgaatatctggaacacgcccgcgtgatgtatttctac
aacaaaggcagcgaggatgtttacatctcttccgccgattggatgacgcgcaatttggac
taccgcgtggaggctgccgtaaaaattaccgctcaggaacttaagcaagaactcatcgac
ttgctccacatccagcttaaagacaatgtgaaagccagaatcttagacaacgagatgaaa
aatcactatgtaaaaggttccaagaaggaaaaaatccgttcacaaatagaaatttaccat
tacctaaaaaataaaacctactaa
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