Rosa chinensis (China rose): 112175911
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Entry
112175911 CDS
T06020
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112175911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112175911
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
112175911
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
112175911
FA (Fanconi anemia) pathway
Downstream FA components
112175911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Pex19
ResIII
Motif
Other DBs
NCBI-GeneID:
112175911
NCBI-ProteinID:
XP_024169418
LinkDB
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Position
7:complement(33508602..33519249)
Genome browser
AA seq
1267 aa
AA seq
DB search
MACATPGANPKSSSKSSYRIGGIDVEFPYQPYAAQMAFMSRVVSTLDRAVRDDHCHALLE
SPTGTGKSLSLLCSILAWQQSFKAKNMYANLSHSKPNPKAMTDPIAHGGGFVPEEEHSSA
QPSEKPGPSQSENRKKKEAPTIYYASRTHSQISQVIREYRKTSYRVPMAVLASRKHYCTN
AQVHGRENIDEECKLLLKDRVVGCVEFKNVHKVKGHPSLQKGGCHEAYDIEDLVKVGKVV
KGCSYYAARSMSDDAELVFCPYNYIINPVIRGAMEVDIQGSIVVLDEAHNIEDVARDAGS
VDIDEEVLNKLQMELEQLCPLDVLVYQPLYEMIQDLLSWIERRKDKLEKREFQHFVSCWT
GDKALRELQEANISQQCFPVLLECATKAIKAATDKESEVAHLSGMAVVTLEGLFSSLTYF
FSRNGSHMVDYQLALQRYVKRDVGTFGDWTHTFSLWCLNPAVVFQDIANLSLSVILTSGT
LSPMNSFSSELGLQFGSTLEAPHVIDVESQVWPTIISTGPGNVPLNASYKTADEYAFQDA
LGKSLEEIFKSVPAGCLVFFPSYKLMGKLCKRWRETGQWSLLNERKSLFIEPGGDQEEFE
FVLKGYYDSIRGGNKPAFGRNKGANKKLRQSSFTAVKCAQKNNTDGAALLAVCRGKVSEG
IDFTDDNARAVIIVGIPFPNMNDIKISLKKKYNDAYKSSKGFLSGNEWYCHQAFRALNQA
AGRCIRHRFDYGAVILLDERYQVGRNTAYVSKWLKKSIRQYESFDTSIEELKSFFNNVKE
RVSKNMVNVSQSSETREKIILSMDHSKGFTRLKDQNLNKSDPQGQTKTYVGKHDSLLTSQ
DDLDVSSRMDVYADNSKDFINIRSTPQKDTRYLKPSLSMSFSDADPDISVVNETPCMDGI
FSTCSPGSITKDEKCCLTSTTIESSSFFLDQFSFQSTSLTNCSKASPKGQCSVAATPEKN
ATLNSYSSMTETESSLDLSVNSHIQKRRKSIYQSLVNSSQGQSGGAPDSETSDCPDSVKE
TMTSGDAIRKIEFNESNYSEHYCKSIVHHLPPSTCGTSSVSVGSVMDKRLEICCSLCKSP
LGLPENNLHVTCSITSSSKLYLESLHNEILKSQTGNTSAGIRVLITDISSVDYRVCHEIS
EGTPGQGVWCEKDGFVFGTILCPFCRHHKSSHDNFLGVQVMATNASNVHLLNKIMFYLDQ
LEITNFEASSDKATKDKDFLPVNGSNVDKVAILNPFDKFSYSPVQQDQGGWRTTKSKLKL
PKRPSRS
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtgcaactccgggagcaaaccctaaaagctcatcgaaaagctcgtaccgcatc
ggaggcatcgatgtggagttcccgtaccagccgtacgcggcgcagatggcgttcatgagc
agagtcgtctccactctcgatcgagctgtcagggacgaccactgccacgccttgctcgag
tctcccaccggaaccggcaaatcgctctctcttctctgctccatcctcgcctggcagcag
agcttcaaggccaagaatatgtacgccaatctctcccattccaagcccaaccccaaggcc
atgaccgatcccatcgcccacggcggcggctttgttcccgaagaggagcactccagtgct
cagccatcggaaaagccagggccgtctcaatctgaaaataggaagaaaaaggaagctcct
accatatactatgcatcgaggacacattcacaaatttctcaagtcatccgtgaatatcgg
aaaacttcctaccgggtgcctatggcagtactggcctctaggaagcattactgcacaaat
gcacaagtacatgggagagagaatattgacgaagaatgtaagcttcttttgaaggatcga
gtggttggatgcgtagaatttaaaaacgtacacaaagtcaaaggacatccatctcttcag
aaaggaggctgccacgaggcctacgatattgaggatctcgtgaaagttggaaaagttgtc
aaaggttgttcatattatgccgctcgttctatgtcagacgatgcagaactggttttttgt
ccatataactacatcattaatccagtcattaggggagccatggaagtagatattcagggg
tccattgtagttctggatgaagcccacaatatagaggatgttgctcgcgatgctggtagt
gtagatattgatgaagaagttttgaacaaattgcagatggaactagagcagctttgccca
ctggatgttttggtttaccaacctctgtatgaaatgatacaggacctcttaagttggatt
gagcgaaggaaagacaagttagaaaagcgcgaatttcagcactttgtgtcttgttggact
ggtgacaaggctttgagagagcttcaggaagctaatatatcacagcagtgcttcccagtc
ttacttgaatgtgccacaaaggcaatcaaagctgctacagataaagaatcagaggtagcc
catttaagtggcatggctgttgtgacattggaaggattgttctcttcacttacttacttc
ttctcaagaaatgggtctcatatggtcgattatcagcttgctttacagagatatgttaaa
agagatgttggaacttttggcgattggacacatacattcagtttgtggtgcttgaatcct
gctgttgtgtttcaagatattgccaatctttccttgtcagtcattttaacatcggggact
ttgtcaccaatgaattccttttcatctgagcttggccttcagtttggaagtactctggaa
gctccccatgtaattgatgttgaatcacaggtttggcccactattatttctactggccca
ggtaatgtgccattgaatgcaagttataagacagcagatgaatatgccttccaggatgca
cttggaaaatccttagaggaaattttcaaaagtgtgccggctgggtgtcttgtcttcttc
ccaagttacaagctaatggggaagttatgcaagcgttggcgtgaaacaggacaatggtct
ctgctaaacgaaagaaagtccctttttattgagcccggtggagaccaggaggaatttgag
tttgtactgaagggttattatgattcaattcgtgggggcaataagcctgcttttgggaga
aataaaggtgctaacaagaaattaagacaaagtagcttcactgcagtcaagtgtgcacaa
aagaataacactgatggagctgctttactggctgtgtgccgaggaaaggtttcagaagga
atcgacttcacagatgacaatgctcgggctgtgataattgtgggaattccatttcccaac
atgaatgacatcaagatttccttaaagaagaaatacaatgatgcatataagtcatccaag
ggctttctgagtggaaatgaatggtactgtcaccaagccttccgagctttaaatcaagct
gcaggacgttgtattcgacataggtttgattatggagctgtcatcttattagatgaacgt
tatcaggtaggaagaaatacagcatatgtgtcaaagtggctaaagaaatccattagacag
tatgaaagctttgacacgtcaatagaggaattaaaatcctttttcaacaatgtcaaggaa
agggtaagcaagaatatggtcaatgtgtcacagagttctgagactagagagaaaatcatt
ctttctatggatcacagtaaagggtttacaagactgaaagatcagaatttgaataaatct
gatcctcagggacagacaaaaacttatgtaggcaagcacgattctctactgacatctcaa
gatgatcttgatgtatcatcacgaatggatgtatatgctgacaatagcaaggactttatc
aatatcagatctactcctcagaaagatacaaggtaccttaagccatctttgtccatgtca
ttctctgatgcagatccagacatctcagttgtcaatgaaaccccttgtatggatggcatc
ttttccacgtgcagtccaggatcaattactaaggatgagaagtgctgtttgacttcgact
acaattgagtcctcttctttctttttggaccaattctcattccaatcaacatcattaacc
aattgtagcaaggcttctccaaagggccagtgttctgtagccgctactcctgaaaagaat
gcaactttgaactcttacagctcaatgacagaaacagaatcatctttggatttgagtgtt
aattctcatatccagaaaaggagaaagtccatatatcaatccttggttaactccagtcag
ggacagtctggtggtgctcctgattctgaaacttctgattgtcctgattccgtaaaagag
acgatgaccagtggagatgccattcgcaaaattgaatttaatgaatctaattattcagag
cactattgtaagtccatagttcatcatcttcccccgagtacttgtggcacttcatctgtg
tcagttggttctgtcatggacaagagactagaaatctgttgctcactctgcaaaagccca
ttgggccttcctgagaataatctacatgttacatgctcaataacttcatcatcgaaactt
tacttggaatctcttcataacgaaatattgaaatctcaaactgggaatacatcagcaggc
atacgtgttctcataactgacatttcatcagttgattatcgagtctgccatgaaatttct
gaaggcactcctggacagggtgtatggtgtgaaaaagatgggtttgttttcggtaccatc
ttgtgccccttttgccgtcaccacaagagtagccacgataatttccttggcgtacaggtc
atggcaactaatgcatcaaatgttcatttactcaacaagatcatgttttacttagatcag
ttggaaattacaaattttgaggcatcttctgacaaggctacaaaagacaaagatttcttg
cctgttaatggttccaacgtcgacaaagttgccattctcaatccctttgataaattctcg
tactctccagtacagcaggaccaaggaggatggaggactacaaaatcaaagcttaaacta
cccaaaagaccctcacgttcctga
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