Rosa chinensis (China rose): 112176461 Help Entry 112176461         CDS       T06020                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism rcn  Rosa chinensis (China rose) Pathway rcn03430   Mismatch repair Brite KEGG Orthology (KO) [BR:rcn00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     112176461  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rcn03400]     112176461 DNA repair and recombination proteins [BR:rcn03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      112176461 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor Motif Other DBs NCBI-GeneID:  112176461 NCBI-ProteinID:  XP_024170157 LinkDB All DBs Position 7:complement(67724626..67733267) Genome browser AA seq 1263 aa AA seqDB search MSRRRSNGASPLVNPQRQITSFFAKATSSPSPIPKSKSKPSPGSSPSSTTPSPLQSKPKP DPDPNPKKSLYGQEVVGKRIKVYWASDRAWYEGCVKLFNKESGKHLLQYDDGDEETLDLA TEKIEWIQETVQTFKRLRRGPLPTPEAEEEEEVKEDSDDDDSGDEDWGKSVEKELVEEED EVMELEEEQDDDDDDEGLQPKPKGRRGGSGGKRKLSGGGNLGSAKKTKTGGHVATNGLKP NLIQPTTTTTNAAESTKAVNGINIGDASERFSKREADKFRFLGEKRRDAKKRQPGDANYD PRTLYLPPDFLKNLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYM KGEQPHCGFPEKNFSMHAEKLARKGYRVLVIEQTETPEQMELRRKEGGSKDKVVKREVCA VVTKGTLTEGEMLSANPDASYLMAVTETSQNLANQNGERIFGVCVVDVATSRVILGQFAD DLECSALSCLLSELRPVELVKPAELLSPETEKVLLRHTRSPLVNELVPLLEFWDAERTVC EVKSIYSCADDSHMEEHGLGCMPDVLSELVGAGEDGICALSALGGVLFYLKQAFLEETLL RFAKFELLPSSGFGGIISKPYMVLDAAALENLEIFENSRNGDSSGTMYAQLNHCVTAFGK RLLKTWLARPLYHVELIKERQDAVSSLQGINLPHALEFRKAMARLPDMERLLARVFASSK ATGRNANKVVLYEDAAKKQLQEFITALRGCELMAATSCSLGVNLGNVESRQLHHLLTPGK GLPNVNSVLKHFKDGFDWVEANSSGRIIPHEGVDTEYDAACGKVKEIESHLTKYLNEQRE LLGDKSITYVTIGKEAYLLEVPESLRESIPQDYELRSSKKGFFRYWTPNIKKSLTELSQA ESDRESSLKSILQRLIGQFCEHHIKWRQLVSVTAELDVLISLAIASDYSEGPTCRPVIMS SSDTDEVPLLSANSLGHPVLRSDSLGKGTFVPNDITLGGSGHASFVLLTGPNMGGKSTLL RQVCLAVILAQLGADVPAESFELSPVDRIFVRMGAKDHIMVGQSTFLTELSETATMLSSA TRNSLVALDELGRGTSTSDGQAIAESVLEHFVHKVHCRGMFSTHYHRLAVDYQNNSQVSL CHMACHVGNGDAGVEEVTFLYRLTPGACPKSYGVNIARLAGLPISVLQKAAAKSREFEAA YGKHLKQSEDSFPFQSPVNKMVECIQKVTNIVAKLTSHESTEGINIDSLTEVWHKARLLE QQS NT seq 3792 nt NT seq  +upstreamnt  +downstreamnt atgtcacgtcgtcgaagcaacggcgcatccccattggttaacccacagcgccaaatcact tccttcttcgccaaagccacttcctctccatctccaatccctaaatctaaatctaaaccc agcccgggttccagccctagctccaccacgccttcgcctctccaatccaagcctaagccc gatcccgatcccaatccgaagaaatcgttgtacggccaagaggtggtcggcaagaggatc aaggtgtactgggcgagtgatagggcctggtacgaaggctgtgtcaagttgttcaataag gagagtggtaagcacttacttcagtacgacgatggcgacgaagagactttggatttggcc accgagaaaatcgagtggattcaagagaccgtccagacctttaagcgcttgcgccgcggt cctttgcccactcccgaggcggaggaggaggaggaggtcaaggaagacagtgatgatgat gattccggcgatgaggattggggaaagagtgtggaaaaggaactagttgaggaggaagac gaggttatggaattggaggaggagcaagatgatgatgatgatgatgagggactccagccc aagcccaaaggaaggcgcggcggctccggtggtaaacggaagttgagcggcggagggaat ttggggtctgctaagaagaccaagactggtggacatgtagccactaatggcctcaagcct aatttgattcagcctactactactactactaatgctgctgagagcacaaaggcggttaat ggtatcaatattggtgatgcctcagaaaggtttagcaagcgtgaagctgacaagttccgt ttccttggggaaaaacgcagggatgccaaaaaaagacaacctggggatgcaaattatgat ccaagaactctatatctacctcctgatttcttaaagaatttatcaggtggccagagacaa tggtgggagtttaagtcaaagcacatggacaaagttctatttttcaagatgggcaagttc tatgaactttttgaaatggatgcacatataggagcaaaagaacttgatcttcaatatatg aagggtgaacaaccccattgtggatttccagagaagaacttttcaatgcatgcggagaaa ctggctaggaagggttaccgagttcttgtcatagagcagacagaaacacctgaacagatg gagcttcgtcgcaaagagggtggctctaaagataaggttgtgaaacgtgaagtatgtgca gtagttacaaaaggaacactaactgaaggagagatgctgtccgcaaaccctgatgcttct tatctaatggcagtgactgaaacctctcaaaatttagcaaaccaaaatggcgagcgtatt tttggagtttgtgtggttgatgttgctaccagtagggttattcttggacagttcgcagat gatttagagtgcagtgccttgtcttgtctcttgtctgaattgaggcccgtggaactagta aaaccagcagaactacttagtcctgagacagaaaaagtactgctaagacatacaagaagt ccactagtgaatgagttggttccacttctggaattctgggatgctgagagaactgtttgt gaagttaaaagtatctatagctgtgctgatgattctcatatggaagaacatggcttgggc tgcatgccagatgtattgtctgagcttgtgggagccggggaggatggcatctgtgcactt tcagctcttgggggtgttcttttctacttaaagcaggcttttctagaagagacattgctt agatttgcaaaatttgagttacttccaagttctggttttggtggtatcatatcaaaacca tacatggttctcgatgcagctgcactagagaacctggagatttttgaaaacagcagaaat ggagactcttcagggacaatgtatgcgcaattgaatcactgtgtgactgcatttgggaag agattgcttaagacatggcttgcaagacctctgtatcatgtagagttaattaaggaacgc caggatgctgtctcaagtttacagggaatcaaccttcctcacgcacttgaatttcgaaaa gcaatggctaggcttccggacatggagcgcttgcttgcacgggtcttcgctagcagtaaa gctactggaaggaatgcaaacaaagtggttttatatgaggatgccgccaaaaaacagctc caggagtttattacagctctacgcggttgtgaattaatggcggcaacaagttgctctctt ggtgtcaacttgggaaatgttgaatctcgacaacttcatcatttgctgacacctggtaaa ggtcttcctaatgtcaactcagttttaaagcacttcaaggatggctttgattgggtagaa gccaatagttcaggtcgtataatacctcatgaaggagttgatactgaatacgacgctgca tgtggaaaagtaaaagagatcgagtctcatttaactaagtaccttaacgaacagagggaa ttactcggagataaatcgatcacttatgtcacaattggaaaagaagcatacctattggaa gttccagaaagtttgcgtgagagtatacctcaggattatgaattacgttcatccaaaaag ggtttctttaggtactggacaccaaatattaagaagtcattgactgagctctcacaagct gaatctgatagggagtcctcacttaaaagcattttgcagaggttaattggacaattctgc gagcatcatattaagtggagacagttggtctctgtgactgctgaactggatgttttaatc agtctagcaattgcaagtgattattccgagggacccacctgtcggcctgttatcatgagt tcatcagatacagatgaagtacccctcttgtccgcaaatagtttgggacatcctgttctt agaagtgattctttaggaaaaggtacatttgtccccaatgacattactcttggaggttct ggtcatgcaagctttgtccttctcactggccctaacatgggtgggaagtcaactctgctt cgccaagtttgcttggctgtgattttagcccagttaggagcagatgtgcctgcagagagc tttgagctatctcctgttgatcgaatctttgttcggatgggtgctaaagatcatattatg gtaggccaaagtacatttctgacggagctgtcagaaactgcaacaatgctgtcatctgct actcgtaactcattggtagcactggatgaacttggacgtgggacatcaacttcagatgga caagccattgcggaatcagttcttgaacattttgtccacaaggttcactgtcgaggaatg ttttctactcactatcacaggctagctgttgattatcagaataattctcaggtttcactc tgccatatggcatgccatgttggaaatggagatgctggtgtagaagaagtgacatttctt tacagattgactcccggtgcttgtcctaaaagctatggtgtcaacattgctcggttagct ggacttcctatttctgtgcttcaaaaagctgctgctaagtccagggaattcgaagctgca tatggtaaacacttgaagcaatctgaagatagctttccctttcaaagtccagttaacaag atggttgagtgcatccaaaaggttaccaacatcgtggcaaagttgactagtcacgagtct actgagggcatcaacattgactccctgactgaagtttggcataaagcaagattgcttgag caacaaagttga

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