Rosa chinensis (China rose): 112179072
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Entry
112179072 CDS
T06020
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112179072
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112179072
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112179072
03036 Chromosome and associated proteins [BR:
rcn03036
]
112179072
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112179072
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112179072
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112179072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
Htt_N-HEAT_1
PDS5
CLASP_N
Adaptin_N
RTP1_C1
Cnd1
Motif
Other DBs
NCBI-GeneID:
112179072
NCBI-ProteinID:
XP_024173153
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Position
7:complement(5406989..5412233)
Genome browser
AA seq
586 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEDRTRKELIPFLSENNDDD
DEVLLAMAEELGVFVPYVGGVEHANILLPPLETLCTVEETCVRDKAVESLGRIGAQMREQ
DLVEYFVPLVKRLAAGEWFTARVSSCGLFHIAYSSAPESIKTELRTIYNQLCQDDMPMVR
RSAATNLGKFAATVEAAHLKTEVMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEATRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILDPELAVQHILPFVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGSLCMQWLNDKVYSIRDAAANNVKRLAEEFGPDWAMQHIVPQV
LEMINNPHYLYRMTILHAISLLAPVMGSEITCSKLLPVVITASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKMIRPCLVELSEDPDVDVRSFATQALQSSDVMMSN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtggatgagcctctatatccaattgctgttttgattgatgagctcaagaac
gaagacattcaactgcggttgaactcaatccgcaggctctcgaccattgctcgtgcattg
ggggaggacaggaccaggaaggaactgattcctttcctgagcgagaacaatgacgatgac
gatgaggtgcttcttgcaatggcagaggaattgggggtgtttgtcccctatgttggcggc
gtagagcatgccaatattctgctcccaccgttggaaactctatgcactgttgaggaaaca
tgtgtgagggacaaggcagtggagtcgttgggtaggattggggcgcaaatgagggaacag
gacttggttgagtatttcgtccctttggtcaagaggctggctgcaggcgagtggtttact
gctcgtgtttcatcgtgtggtttgtttcatattgcttactctagtgcccctgaatctata
aaaactgaacttcgaactatatacaatcaattgtgccaagatgacatgcccatggttaga
agatctgctgcaactaacctgggaaaatttgctgcgactgttgaagctgcccacctcaaa
actgaggtcatgtctatatttgaggatttgacacaggatgatcaagattctgttcggtta
ttggctgtcgagggttgtgcagctcttgggaagttgttggaacctcaagattgtgttgcc
catattcttcctgtcattgtcaatttttcacaggataagtcatggcgtgttcgttacatg
gttgcaaatcaattatacgagctgtgtgaagctgttggcccagaagccaccaggtcagac
ctggtgcctgcctatgttcgtcttcttcgcgataatgaggctgaggtgcggattgctgct
gcaggaaaagtaaccaagttttgccgaattttggacccagaacttgccgttcagcacatc
ctaccatttgttaaggaattgtcaacagattcatcccagcacgttcgctctgcattggct
tcagtgataatgggaatggcaccagttttaggaaaggatgcaaccatagagcaactgctg
cctattttcctttctcttctcaaagatgagtttccagatgtccggctgaacattattagc
aagcttgatcaagtcaaccaggtaattggaattgatctgctgtcccagtctctactgcca
gcaattgtggaactggcagaggatagacattggagggttcggcttgcgataatagaatat
atccctttattggcaagtcagttgggtgtggggtttttcgatgataagcttggttctctt
tgcatgcagtggttaaatgataaggtttactcaatacgtgatgcagctgctaataatgtg
aagcgccttgcagaagaatttggccctgattgggccatgcagcatatagtcccacaggtt
ttggaaatgattaacaaccctcactatttgtatcggatgaccattctacatgcaatttcc
ctacttgcccctgttatgggatcagaaattacttgttccaaacttctaccggtggttatc
actgcatcaaaagatagggttccaaacatcaagttcaatgtcgccaaggtgttgcagtca
cttattcctatagttgatcaatctgtggtggagaagatgattcgtccctgtttggttgag
ctcagtgaagatccagacgttgatgtaagatcttttgcgacccaagcactacagtcaagt
gacgtcatgatgtctaactag
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