Rosa chinensis (China rose): 112191697
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Entry
112191697 CDS
T06020
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112191697
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112191697
04147 Exosome [BR:
rcn04147
]
112191697
04090 CD molecules [BR:
rcn04090
]
112191697
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112191697
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112191697
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112191697
CD molecules [BR:
rcn04090
]
Proteins
112191697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
Zeta_toxin
AAA_22
AAA_29
RsgA_GTPase
AAA_5
DUF815
nSTAND1
AAA_30
AAA_15
APS_kinase
DUF87
SbcC_Walker_B
Rad17
Motif
Other DBs
NCBI-GeneID:
112191697
NCBI-ProteinID:
XP_024186868
LinkDB
All DBs
Position
3:complement(16234250..16240440)
Genome browser
AA seq
1347 aa
AA seq
DB search
MSQDSQGIKTIEQWRWSDMQGLELVTDPPPSSSDPSKTNPTTTTTTAKEPREAQAMESSA
EPTTKKESNDSGGGEKPEAVPSIGFGEVFRFADGLDYVLMGIGSVGAIVHGCSLPIFLRF
FADLVNSFGANANDMDKMMQEVLKYALYFLVVGAAIWASSWAEISCWMWTGERQSTKMRI
KYLEAALSQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGF
TAVWQLALVTLAVVPLIAVIGAIHTTTLAKLSGKSQEALSQAGHTVEQTVVQIRVVMSYV
GESRALEAYSSALRIAQKLGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHFTNG
GLAIATMFSVMIGGLALGQSAPSMGAFAKAKVAAAKIFRIIDHKPGMDRNSESGVELESV
TGLVELKNVDFSYPSRQDVRILNNFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPSS
GQVLLDGHDIKTLKLKWLRQQIGLVSQEPALFATTIKENILLGRPDADQVEIEEAARVAN
AHSFIVKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKL
VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGENGVYAKLI
RMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSL
DATHPNYRLEKLAFKEQASSFWRLAKMNSPEWVYALVGSIGSVVCGSLSAFFAYVLSAVL
SVYYNPDHDFMIKQINKYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLTAVL
KNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRL
ALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEGKIV
GLFSSNLQIPLRRCFWKGQIAGSGFGIAQFALYASYALGLWYASWLVKHGISDFSKAIRV
FMVLMVSANGAAETLTLAPDFIKGGRAMQSVFELLDRKTEIEPDDIDATAVPDRLRGEVE
FKHVDFSYPSRPDVPVFRDLSLRARAGKTLALVGPSGCGKSSVISLVQRFYDPTSGRVII
DGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHESATEAEIIEAANLANAHKFV
SALPDGYKTFVGERGIQLSGGQKQRIAIARALLRKAELMLLDEATSALDAESERSIQEAL
ERACSGKTTIVVAHRLSTIRNASVIAVIDDGKVAEQGSHNHLLKNYPDGCYARMIQLQRF
SHSQAIGMASGSSSSVRPREEEEREGK
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattctcaggggataaagacgattgagcagtggagatggtcagatatgcaa
ggccttgagcttgtgactgaccctcctccttcttcttctgacccatctaaaaccaaccca
acaacaacaacaacaactgctaaagagccaagagaagctcaagcaatggagagctctgct
gagccaacaacaaagaaggagtctaatgacagcggtggaggtgagaagcctgaggctgtt
ccaagcatcggcttcggagaggttttcagattcgctgatggattggattacgtattgatg
ggaattgggtctgttggcgcaatcgtgcatggttgttctctgcccatctttcttcgcttc
tttgctgatcttgtcaactctttcggggcaaatgcgaatgacatggacaagatgatgcaa
gaggttttgaagtatgcattgtactttcttgttgtgggagctgcaatatgggcttcttca
tgggcagagatatcgtgttggatgtggaccggagaaaggcaatcgaccaagatgaggatc
aagtaccttgaagctgctttgagccaggacattcagtttttcgatacagaggttcgaacc
tccgatgtcgtttttgccatcaacactgatgcagtgatggtccaagacgctattagcgag
aagttgggtaatttcattcactacatggcgacatttgtatctggattcgtggtgggtttc
actgctgtgtggcaattagctcttgtgactctagcagtggtgcccctgatagctgtgatt
ggagccattcacacgaccacattagccaaactctcagggaagagccaagaggctctttca
caagcaggacacactgtagaacagactgtagttcaaattcgagttgtcatgtcgtacgtt
ggggaatcgagagcactagaagcatactcctcagcattgagaattgcccagaagcttggt
tacaagactggatttgctaaaggaatgggacttggagcaacttactttgtagtcttctgc
tgttatgcacttcttttatggtatgggggttatcttgttaggcaccacttcaccaatgga
ggtcttgccatagccaccatgttttcggtcatgataggtggactggctttggggcaatct
gctccaagcatgggcgcatttgcaaaggctaaagttgcagctgccaagatatttcggatc
attgaccacaagccaggtatggaccgaaacagtgaatcaggggttgaattggaatctgtt
acaggactagtggagctgaaaaatgtggatttctcctacccatcaaggcaggatgttcgt
attctcaacaatttctctttgaatgttccggctggaaaaaccatagctttggtcggtagc
agtggctctggtaaaagcactgtggtctccctcattgagagattttatgacccctcctca
ggacaagttctgctagatggacatgacataaagacattgaaattaaagtggctaaggcag
cagatagggcttgtgagccaagagcctgctctgtttgctaccaccattaaagagaatata
cttttggggaggcctgatgcagaccaagtagagattgaagaagctgccagagttgccaat
gctcattcattcattgtcaaacttcctgatggttttgatactcaggtaggggaaagagga
gtgcaactgtctggaggacagaagcagaggatagccatagcaagggcaatgcttaaaaac
ccagcaatccttctcttagatgaggcaacaagtgcattggactctgagtcggaaaagctg
gtgcaagaagccctggaccgttttatgataggcagaacaactcttgtcattgctcaccgc
ctctcaaccattcgcaaagctgaccttgtagctgtactccagcagggaagtgtttctgaa
attggaacccatgatgaactcttttctaaaggagaaaatggtgtttatgccaagctcatt
cgaatgcaagaggcagctcatgagaccgctctcaacaatgccagaaagagtagtgctagg
ccttctagtgcaagaaactctgttagctcaccaataatcgcccgaaattcttcatacggt
cgatcaccatattcacgcaggctctctgacttttccacttctgattttagtctctccctt
gatgccacacaccccaattaccgtctagaaaagcttgccttcaaggagcaagccagttcc
ttctggcgccttgccaagatgaactctcctgaatgggtgtatgcattagttggttcaatt
ggctctgttgtttgtggttctcttagtgctttctttgcatatgttctaagtgcagtcctc
agtgtctactacaatccggaccatgatttcatgatcaagcaaattaataagtactgctat
ttgttaattggactttcatcagctgcactactcttcaacacgctacaacattctttctgg
gatattgtgggagaaaatcttacaaaacgggtgagggagaaaatgctgacagcagtattg
aaaaatgaaatggcatggtttgatcaggaggaaaatgagagtgccaggattgcagcaagg
ctggcccttgatgccaacaatgtcagatcagcaattggagacaggatttctgttattgta
cagaacacagcactcatgctagtcgcttgcactgcaggatttgttttgcaatggcgcctt
gcccttgtcctcgtagctgtcttccctgttgttgttgccgccacagttttgcagaaaatg
ttcatgaccggtttctcgggagaccttgaagctgcacatgccaaggccacccaactagct
ggggaggccatagccaatgtaaggactgttgctgcattcaactccgagggaaaaattgtt
ggtctcttttcctccaacctgcagattcccctgcgtcggtgtttttggaagggtcagatt
gcaggaagtggatttgggatagctcagtttgcactttatgcctcctatgctctaggtctt
tggtatgcttcctggcttgtaaagcatggaatctctgatttctcaaaggcgatccgagtt
ttcatggtcctcatggtatctgctaacggtgcagcagagacactaaccctggctcctgac
tttattaagggtggtcgagccatgcaatcagtttttgagctccttgaccgcaaaactgaa
attgaacctgatgatattgatgctactgcagtgcctgaccgtctgcgtggagaagttgag
tttaagcatgtagacttttcgtatccttctcgacctgatgttcctgtgtttcgtgatctc
tccctccgtgcccgagcaggcaagactcttgctcttgttggtcctagtgggtgtggaaag
agctcagtcatttcattagtacagcggttttacgacccaacatcaggaagagttattatt
gatggaaaggatattcgcaaatacaatctcaagtctctcagaaggcacattgctgtggtt
ccccaggagccatgcctctttgctacaactatatatgaaaatatcgcttatggacacgag
tcagcaactgaggctgagatcattgaagctgctaatctagccaatgctcacaagtttgta
tctgcattgccagatggctacaaaacgtttgttggggagaggggaattcaactatctgga
ggacagaaacaaaggattgctattgccagggctttactgaggaaggcagagcttatgctt
ctcgatgaagccacaagcgcacttgatgccgagtccgagagatctattcaagaagctctg
gagcgcgcttgttcaggaaaaaccacaattgtggttgcacacaggctatcaactattaga
aatgccagtgttattgcggtaattgatgatgggaaagtggcagagcaaggatcacacaac
catctattgaaaaactacccggacgggtgttatgcgcgcatgatacagctacaaagattt
tcacacagccaggccattggaatggcatcaggttcaagttcttcagtaagaccaagggaa
gaggaagaaagagaaggcaagtaa
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integrated database retrieval system
