Rosa chinensis (China rose): 112193003
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Entry
112193003 CDS
T06020
Name
(RefSeq) ABC transporter B family member 11 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112193003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112193003
04147 Exosome [BR:
rcn04147
]
112193003
04090 CD molecules [BR:
rcn04090
]
112193003
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112193003
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112193003
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112193003
CD molecules [BR:
rcn04090
]
Proteins
112193003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_21
Zeta_toxin
AAA_5
DEAD
AAA_25
AAA_15
AAA_30
DUF87
nSTAND1
AAA_7
DLIC
DUF815
nSTAND3
Sigma54_activ_2
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
112193003
NCBI-ProteinID:
XP_024188759
LinkDB
All DBs
Position
3:complement(32792695..32799431)
Genome browser
AA seq
1295 aa
AA seq
DB search
MAEENGVNGDTKNHENHAEEEKSSVPINGDQPGSSDSNGDEKVEKIPFSKLFSFADKTDV
ILMVVGTIGAIGNGSCMPLMTVLFGEMIDSFGSNQNSDIVSVVSKVSLKFVYLAVGAAVA
AFLQVSCWMVTGERQAARIRGLYLKTILRQDVAFFDMETNTGEVVGRMSGDTVLIQDAMG
EKVGKVLQLLSTFIGGFIIAFIKGWLLTLVMLSSIPLLVASGATMSIIITKMASRGQTAY
AKAANVVEQTIGSIRTVASFTGEREAITSYNKYLVDAYKSGVHEGSAAGIGLGLVMCVVF
SSYALAVWFGSKMIRENGYTGGEVLNVIVAVLTGSMSLGQTSPCMSAFAAGQAAAYKMFQ
TISRKPEIDAYDEKGKTLGDISGDIELRDVYFSYPARPDEQIFDGFSLCIPSGTTAALVG
QSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLKWIRSKIGLVSQEPVLFASSIKEN
IAYGKDGATSEEIQAAAELANAAKFVDKLPQGLDSLVGEHGTQLSGGQKQRIAIARAILK
DPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHKGKMV
EKGSHLNLLKDPEGAYSQLIRLQEVNKESEQTSDDQNKPEITLASLRQSSQRTSSQRLSF
ARSLSRNSSVGNSSRHSYSVAFGLPTGLGGIGVQDAAYEETELAPEQPPKVSLRRIAALN
KPEIPVLIIGTIAAIINGVILPIFGVLISRVIKTFYEPPHQQKKDAAFWAIIFMILGLIS
FVVIPARGYFFSVAGSKLIQRIRLLCFERVVHMEVGWFDEPENSSGAIGARLSADAASVR
ALVGDALAQMVQNMAAAVAGLVIAYIACWQLAFIILALLPLIAVNGYVQIKFMKGFSADA
KMMYEEASQVANDAVGSIRTVASFCAEEKVMELYRRKCEGPMKTGIRQGLISGIGFGVSF
FFLFCVYATSFYAGAQLVKAGKTTFTDVFQVFFALTMAATGISQSSSFGPDSGKAKTSAA
SIFAIIDRPSKIDPSNESGTKIDGGVKGEIELRHVSFKYPSRPETPIFRDLNLTIRSGKT
VALVGESGSGKSTVVALLQRFYDPDSGHITLDGIELGNYNLKWLRQQMGLVSQEPVLFND
TIRANIAYGKEETATEAEIIAASELANAHKFISTLHQGYDTVVGERGIQLSGGQKQRVAI
ARAIIKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVV
KNGVIVEKGKHDNLINITDGFYASLVALHMSSSTA
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaatggggtgaatggtgataccaaaaatcatgaaaaccatgcagaagaa
gagaaaagctcagtccccataaatggggatcagccaggctcatcagatagcaatggagat
gagaaagttgaaaagattcctttctccaagctattctcctttgcagataagactgatgtt
atcttgatggttgtcggcacgattggtgccattgggaatggttcttgtatgcccctcatg
acggtattgtttggggagatgatagattcttttggatctaatcaaaattcagacatagtc
tcagttgtttcaaaggtctctctgaaatttgtttacctggctgtgggagcagctgtggca
gcatttctccaggtgtcttgctggatggtcacaggggaaagacaagctgcaagaattaga
ggtttgtatttgaaaacaatattgagacaagatgttgctttcttcgatatggaaacaaac
actggagaggtagttgggagaatgtctggtgacactgttctcattcaagatgccatgggg
gagaaggttggaaaagtcttacagctgctttcaacattcattggagggtttataatagca
ttcatcaaagggtggcttctcactcttgtcatgctatcctctattcctttgcttgtggca
tctggtgcaacgatgtccatcattataaccaagatggcatcccgtggacaaactgcttac
gcaaaagcagcaaatgtagttgaacaaacaattgggtccattagaactgttgcatcattt
actggcgagagggaagctataactagttataacaaatatctcgtagatgcttacaaatca
ggtgttcatgaaggttcagctgctggaataggtcttggcttggttatgtgtgttgtgttc
agctcatatgccttggctgtatggtttggttcaaagatgataagggaaaatggatatact
gggggtgaagtactgaatgtgattgttgctgtgttgactggatctatgtctttagggcag
acatcaccatgcatgagtgcatttgctgctggtcaagctgcagcttataagatgtttcag
actattagtaggaagccagagatagatgcttatgatgaaaagggaaagactttgggtgac
atttcgggagacatagagttgagagatgtttatttcagctatccagccagaccggatgag
caaatatttgacgggttctctctttgtatccctagtggcacaactgctgctttggttgga
caaagtggaagtggcaagtcaacagtcatcagtctgatagagagattttatgatccgcaa
gctggtgaagttttaatagatggcataaacctaaaagaatttcaacttaaatggattcgg
agtaaaattggtcttgtcagtcaggaacctgtcctgtttgcatccagcattaaggaaaat
attgcctatggaaaggatggtgctacctctgaagagatacaagcagcagctgagcttgca
aatgcggctaaatttgttgataaattgcctcagggccttgacagcttggtcggtgagcat
ggaactcagctgtctggtgggcagaagcagagaattgctattgcaagagcaattttgaaa
gacccaaggattttacttctggatgaagctacaagtgcacttgatgcagaatctgagagg
gtagttcaagaagcattggataggattatggttaaccgaactactgttgttgtcgctcat
cgtttgagtacagtgaggaatgcagacatgattgctgtcattcataaaggaaagatggtt
gaaaaaggttcacacttgaatttactcaaagatcctgagggagcttactctcagcttata
cgcttgcaagaagtaaacaaagagtcagaacaaacgtcagacgaccaaaacaaacctgaa
ataactctggcatctcttagacagtcaagtcaaagaacatcgagtcaaagactttcgttt
gcacgatccttaagtagaaattcctccgtaggaaatagcagccgtcactcatattcagtg
gcatttggtttacccactggacttggaggcattggtgtccaagatgctgcatatgaagaa
acagaactagcaccagagcaacctccaaaggtctcactccgccgcattgctgccctgaac
aaacctgagattccagttcttattattggaactatagctgcaatcatcaatggtgttata
cttccaatatttggtgtgctcatttccagggttataaagactttctatgaaccacctcat
caacagaagaaagatgcagcattttgggcaataatttttatgatccttggtctgatatca
ttcgtggtgatcccagcacgaggatatttcttttcagtagctggcagcaagttaattcag
cgtatcagattattgtgttttgagagagtggttcacatggaggttgggtggtttgatgag
cctgagaactcaagtggtgcaattggtgcaaggctctcagcagatgcagcgtcggtgagg
gccctagtaggagacgctctagctcagatggttcaaaacatggcagctgcagttgcaggt
ttggtcattgcttatattgcatgttggcagttggcatttattatcctcgcactgcttcct
ctcattgcagttaacggatatgtacaaataaagttcatgaaaggattcagcgcagatgca
aagatgatgtatgaggaggcaagccaagttgctaatgacgcagttggaagtataagaaca
gttgcttctttctgtgctgaagagaaggtaatggaactatacagaaggaaatgtgaaggc
cctatgaagacagggataagacaaggcttgatcagtggtataggatttggggtatctttc
ttctttttgttttgtgtctacgcaaccagtttctatgcgggagctcaactcgtgaaggct
ggcaaaacaacatttacagacgttttccaagttttctttgctctgaccatggcagctacc
ggaatttctcaatcaagctcctttggtcccgattctggtaaagccaaaacttctgctgct
tccatatttgcaataatagaccggccatcaaagatagacccaagtaacgagtctggtaca
aaaattgatggtggtgtgaaaggagagattgagcttcgccatgtaagctttaagtatcca
tctaggccagaaacacctattttccgagacctcaatttaactatccgctctggcaagacg
gttgccctggtcggagaaagtgggagcggaaaatcaactgttgttgcattgttgcaaaga
ttttatgatccggattcaggtcatatcacacttgatggaattgaacttggcaactacaac
ttgaaatggttgaggcagcagatgggactcgtaagtcaagaacctgttttatttaatgac
accattcgcgccaacattgcgtatggaaaggaagaaactgcaactgaggcagaaattata
gctgcatcagagttggccaatgcccacaagttcatcagtaccctacaccagggctatgat
accgtagtaggagaacgaggaatccaattatccggggggcagaagcaacgtgtagccatt
gcgcgtgctataatcaagagccccaagatattactgttggatgaagctacgagtgcactt
gatgccgaatctgagagagtggttcaagatgcattagaccgagtcatggtgaaccggaca
acagtggtggtggctcatagactatccacaatcaagaatgctgatgtgattgcagtggtt
aaaaatggagttatagtagagaaagggaagcatgacaatttgattaatatcaccgatggg
ttttatgcatccctagttgctcttcacatgagctcttcaactgcatga
DBGET
integrated database retrieval system
