Ruegeria conchae: K3740_16135
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Entry
K3740_16135 CDS
T08595
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rcon
Ruegeria conchae
Pathway
rcon00300
Lysine biosynthesis
rcon01100
Metabolic pathways
rcon01120
Microbial metabolism in diverse environments
rcon01230
Biosynthesis of amino acids
Module
rcon_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K3740_16135 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcon01002
]
K3740_16135 (dapE)
Enzymes [BR:
rcon01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
K3740_16135 (dapE)
Peptidases and inhibitors [BR:
rcon01002
]
Metallo peptidases
Family M20
K3740_16135 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UWR02555
LinkDB
All DBs
Position
complement(3253125..3254264)
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AA seq
379 aa
AA seq
DB search
MTDPVELTANLIRCPSVTPEEGGALVLLQRELADAGFECTRVDRGGVSNLFARWGKKGHA
RSFGFNGHTDVVPVGDEAAWTAPPFGAEIRDGVMYGRGATDMKSGVAAFAAAAIDFVRNT
PPDGAVILTVTGDEEGDAVDGTVALLDHMDATDERMSVCLVGEPTCPNKMGEMMKIGRRG
SMSAWFTATGVQGHSAYPHRAKNPLPAMARLMDRLASRELDQGTDHFDASTLAVVTIDTG
NPATNVIPAQCSGTVNIRFNDLHSGASLSDWLKSEAETAAKLFGVEIETKIKISGESFLT
PPGPLSDLVARAVEAETNICPELSTTGGTSDARFIKNHCPVVEFGLVGRTMHQVDECVEV
AQIHQLKAIYARILSDYFA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccagttgagctgaccgcaaatctgatccgttgcccttcggtcacacccgaa
gagggcggcgcgctggttttactgcaacgtgaactcgcagatgcaggttttgaatgcacc
cgtgtggatcgcggaggtgtcagcaacctatttgcgcgttgggggaagaaagggcatgct
cgcagctttggcttcaacggccacacagatgttgttccggtgggtgatgaggccgcttgg
actgcgcccccattcggagcagaaattcgtgatggagtaatgtatggccgtggtgcaacg
gacatgaaatcgggtgtggcggcctttgccgcagcagccattgattttgtgcgcaatacg
cctccggatggtgcggtgattctgacagtaacaggtgatgaagagggtgatgcggtcgat
ggcactgtcgccctgctggatcacatggatgcgacggatgagcggatgtcggtctgtcta
gtaggggaaccaacctgtccgaataagatgggtgaaatgatgaagatcggtcggcgcggc
tcgatgtcagcttggtttaccgcgaccggggtgcaggggcattctgcttatccgcaccgg
gcgaaaaacccattgccagcaatggcgcggttgatggatcggctggccagtcgcgagctg
gatcaggggaccgaccactttgatgcctcaacattggccgtggtgacgatcgatacgggc
aatccagcgacgaacgtcatcccggcgcaatgctctggaacagtgaacatccggttcaat
gacctgcactcgggcgccagcctgagcgactggttgaaatccgaggctgaaacagctgcc
aagttgtttggagttgaaatcgaaaccaagatcaaaatctcaggtgagagctttctgact
cctccgggtccgctctcggatctggtagcacgcgccgttgaggcagaaaccaatatctgc
cccgagctttcaaccactggcggcacttcggatgcccggttcatcaagaaccattgccca
gtggtcgaattcgggctggtcgggcgcacgatgcatcaggttgatgagtgtgttgaggtg
gcacaaattcatcagctcaaggcaatatacgcgcgtattctatcggattatttcgcctga
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