Ruegeria conchae: K3740_17070
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Entry
K3740_17070 CDS
T08595
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rcon
Ruegeria conchae
Pathway
rcon03030
DNA replication
rcon03410
Base excision repair
rcon03420
Nucleotide excision repair
rcon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K3740_17070 (polA)
03410 Base excision repair
K3740_17070 (polA)
03420 Nucleotide excision repair
K3740_17070 (polA)
03440 Homologous recombination
K3740_17070 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcon03032
]
K3740_17070 (polA)
03400 DNA repair and recombination proteins [BR:
rcon03400
]
K3740_17070 (polA)
Enzymes [BR:
rcon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K3740_17070 (polA)
DNA replication proteins [BR:
rcon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K3740_17070 (polA)
DNA repair and recombination proteins [BR:
rcon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K3740_17070 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K3740_17070 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
UWR02734
LinkDB
All DBs
Position
complement(3431990..3434791)
Genome browser
AA seq
933 aa
AA seq
DB search
MTSTQFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLQKYVEGNSGP
DAPTHVAVIFDKGSHTFRNDLYDLYKANREAMPEDLRPQMPLTREATKAFNIACKELEGY
EADDIIATLAVQAREAGGRVTIVSSDKDLMQLVGGGVEMLDAMKNKRIDRDGVVEKFGVG
PERVVDVQALAGDSVDNVPGAPGIGVKTAALLINEYGDLETLLDRAEEIKQPKRRQTLIE
KRDQIELSKKLVQLDENTPLDFTLDDLEVKDPDAETLLGFLAEMEFRTLTKRIADKLGAE
APVIADAPAPVEAEEAEALPFDASKYECVRDAAALQKWIDQAYERGWIAVDTETTGLNEM
IADLVGISLCVEAGEACYIPLTHRESATDDLFGSDAMADGQMPMDEALNLLKPMFEDPSI
LKIGQNMKYDAKIFKRYGVDVAPIDDTMLMSYAMHGGEHGHGMDTLSERYLSHTPIPIKP
LLGSGKSAITFDKVPIDEATAYAAEDADITLRLWELFKPQLHQVQVTTVYETLERPLVPV
LKEMEMHGIKVDRDVLSRMSNAFAQKMAGLEAEIHELAGESFNVGSPAQLGEILFDKMGL
EGGKKGKTGKYSTGADILEDLATEHELPRRVLDWRQLSKLKSTYTDALQTHINPDTGRVH
TSYSITGANTGRLASTDPNLQNIPVRTEEGRRIREAFIAEPGNLMVSLDYSQIELRILAH
IADISTLKQAFSDGLDIHAMTASEMFDVPLDEMTPDIRRQAKAINFGVIYGISGFGLARN
LRIPRAEAQGFIDRYFERFPGIRTYMDDTVAFAKEHGYVQTLFGRKIHTPEINAKGPHAG
FSRRAAINAPIQGTAADVIRRAMVRMPDAINGLPAKMLLQVHDELLFEVAEDAVDQTISI
ARDVMEGASDPAVKLDVKLSVDAGQGANWAEAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgactagcacccaattcggaaaaggctgccatctgcatctcattgatggatcagctttt
atcttccgcgcctatcatgcgctgccgcctttgacgcggaaatcggatgggttgccgatt
ggggccgtgtcgggattctgcaatatgctgcagaaatatgtcgaaggaaattccggtcct
gatgcgccgactcatgtggcggtgatctttgacaaaggctcgcacacgttccggaatgat
ctgtacgacttgtacaaagccaaccgtgaggcgatgcccgaggatttgcgcccgcagatg
ccgctgacccgagaggcaacgaaggccttcaatatcgcctgcaaagagcttgaggggtac
gaggccgatgacatcatcgccaccctcgccgttcaggcgcgtgaggccggtgggcgggtg
accattgtcagctctgacaaggacctcatgcagctggtgggcggcggtgttgagatgctg
gatgcgatgaagaacaagcgcattgatcgcgatggagtcgtcgagaagttcggcgtcggg
cccgaacgagttgtggatgtacaggctttggctggggattcagtggataacgtgccgggt
gccccgggcattggcgtaaaaaccgccgcgctgctgatcaatgaatatggcgatctggaa
accctgctggatcgcgcggaagagatcaaacagcccaagcgtcgtcagaccctcatcgaa
aagcgcgaccagatcgagctgtcgaagaagctggtgcagttggacgaaaacaccccacta
gatttcacgctggatgatttggaggtgaaagatcccgatgcagagaccctgctgggtttt
ctcgctgagatggagttccgcaccctcaccaagcgcatcgccgacaagctgggggccgaa
gccccggtgatcgcagatgcccctgcgcctgttgaagcggaagaggccgaggccctgccg
tttgacgcctcgaaatacgaatgcgtgcgcgatgctgctgctttgcagaaatggatcgat
caggcctatgagcgtggctggatcgcggtagatacagagaccaccggcctgaatgaaatg
atcgccgatctggtgggtatctctctatgtgtagaggccggtgaggcctgctacatcccg
ttgacccatcgcgaaagcgcgaccgatgatctgtttggctccgacgcgatggccgatgga
cagatgccgatggatgaggctttaaacctgctgaaaccgatgtttgaggatccatcgatc
ctgaagatcggacagaacatgaaatacgacgccaagatctttaagcgatacggcgtcgac
gtcgcccccatcgatgacacgatgctaatgtcatacgccatgcacggcggtgagcatggg
catggcatggatacgctgtcggaacgctatctgagccacacgccgatcccgatcaagcca
ttgctggggtccggcaagtcggcgatcaccttcgacaaggttccgattgacgaggctacg
gcctacgctgccgaagacgcggatatcaccctgcgtctgtgggagctgttcaagcctcaa
ctgcatcaggtgcaggtgaccacggtttacgaaaccctcgaacgtccattggtgccggtt
ctcaaagaaatggagatgcacggcatcaaggtcgaccgcgatgttcttagccgcatgtcc
aacgcctttgctcagaaaatggccgggttagaggctgaaattcacgaattggctggtgag
agctttaacgttggttcgcctgcgcagctgggcgagatcctgttcgacaagatgggtctt
gagggaggcaagaagggcaaaaccgggaaatattcgaccggggccgatatcctggaggat
cttgccaccgaacatgaacttccccgtcgggtgttggactggaggcagctctccaagctg
aaatcaacctataccgacgcgctgcaaacacatatcaatccggatacaggccgtgtgcat
acgtcttattcgatcaccggggcgaacacgggccgtctggcctcaactgatcccaaccta
cagaacatcccggtacggacggaagaagggcgtcgcattcgtgaggcgtttattgctgag
ccgggcaatttgatggtcagtttggactacagccagatcgagctgaggatattggctcat
attgcggatatttcgaccctgaagcaggcgttttcggatggtttggatattcatgccatg
accgcatccgagatgttcgatgtgccattggatgagatgacgcctgatatccgccgtcag
gcaaaggcgatcaactttggcgtgatctatggcatctcgggttttggcctggcccgtaat
ctgcgcataccgcgcgccgaggcgcaggggttcattgatcgctatttcgaacgtttccca
ggtattcggacctatatggacgacactgtcgcattcgccaaagaacatggctatgtgcag
accctgttcgggcggaagatccatacgccagaaataaacgcaaaaggcccgcatgcaggc
ttctcaagaagggccgcgattaacgctccaattcagggtacggcagcggacgtgatccgc
cgcgcgatggtgcggatgcctgatgcgatcaacggattgcccgccaaaatgttgctgcag
gttcatgacgaattgttgttcgaggtggctgaggatgccgtggatcaaacgatctcaatc
gcgcgcgatgtgatggagggggcgtcggacccagctgtcaaactggacgttaaactgtct
gtcgacgccggtcagggtgcaaactgggccgaagcgcactaa
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