Rhodobacter capsulatus: RCAP_rcc00520
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Entry
RCAP_rcc00520 CDS
T01213
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex, alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00071
Fatty acid degradation
rcp00280
Valine, leucine and isoleucine degradation
rcp00310
Lysine degradation
rcp00362
Benzoate degradation
rcp00380
Tryptophan metabolism
rcp00410
beta-Alanine metabolism
rcp00640
Propanoate metabolism
rcp00650
Butanoate metabolism
rcp00907
Pinene, camphor and geraniol degradation
rcp00930
Caprolactam degradation
rcp01100
Metabolic pathways
rcp01110
Biosynthesis of secondary metabolites
rcp01120
Microbial metabolism in diverse environments
rcp01200
Carbon metabolism
rcp01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RCAP_rcc00520 (fadB)
00650 Butanoate metabolism
RCAP_rcc00520 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
RCAP_rcc00520 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RCAP_rcc00520 (fadB)
00310 Lysine degradation
RCAP_rcc00520 (fadB)
00380 Tryptophan metabolism
RCAP_rcc00520 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RCAP_rcc00520 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RCAP_rcc00520 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RCAP_rcc00520 (fadB)
00930 Caprolactam degradation
RCAP_rcc00520 (fadB)
Enzymes [BR:
rcp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RCAP_rcc00520 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RCAP_rcc00520 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RCAP_rcc00520 (fadB)
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GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
DAO
UDPG_MGDP_dh_N
NAD_binding_2
Pyr_redox_2
NAD_Gly3P_dh_N
2-Hacid_dh_C
Sacchrp_dh_NADP
NAD_binding_8
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
ADE84285
UniProt:
D5AMZ6
LinkDB
All DBs
Position
554656..556842
Genome browser
AA seq
728 aa
AA seq
DB search
MTDFTCDLGADGVAVITWDVPGKSMNVMSLEGFAQLSALVDGCLADPACKGIVLTSGKKD
FAGGMDLNVIAKMREGGAEAIFAGVMQMHAVLRKIERAGMDPKTLKGGKPIACVLPGTAL
GIGLELPLSCHRIFAAENPKAKIGLPEIMVGIFPGAGGTTRLVRKMGAMMAAPFLLEGKL
SDPKAAKAAGIIDEVSADPMAAARDWVLNATEADLVKPWDAKGYKMPGGAPYHPAGFMTY
VGASAMVSAKTMGVYPAAKALLSAVYEGALVPFDQALRIEARWFTKVLMNPSSTAMIRSL
FINKEALEKGANRPKVADQSVKKLGVLGAGMMGAGIAYVSANAGIEVVLIDASQEAAERG
KAYATGILDKGIQRRKVTEAKKAEVLGRITATTDYAALAGCDLVVEAVFEDPAVKAEVTA
KAEAVIPETAIFATNTSTLPISGLAKASQRPAHFIGIHFFSPVDKMNLVEIIKGKDTGEV
AVAKALDFVRAIRKTPIVVNDARFFYANRCIIPYINEGIRMVAEGVNPVLIENAAKLVGM
PLGPLQLVDETSIDLGVKIAKATKAAMGEAYPDGAVDAVVFWMAEQGRLGKKADAGFYTY
DAGKRGGMWEGLAAQYPRAAAQPELSHVQHRLLMVQVLEAVRAFEQGVLTDIREGDVGAI
LGWGFAPWSGGPFAWLDILGAARAVEICDALSARYGARFETPALLRDIAAKGDSFHARFG
GGAAAKAA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttcacctgtgatctgggcgccgatggcgtggccgtcatcacctgggacgtg
cccggcaagtcgatgaacgtgatgagccttgagggctttgcccagctcagcgcgcttgtc
gacggctgtctggccgatcccgcctgcaagggcatcgtgctgaccagcggcaagaaggat
ttcgccggtggcatggatctgaacgtcattgccaagatgcgcgaaggcggggcggaggcg
atctttgcaggcgtgatgcagatgcatgccgtgctgcgcaagatcgaacgcgccgggatg
gacccgaagacgctgaaagggggcaagccgatcgcctgcgtcctgccgggcacggcgctg
ggcatcgggcttgagctgccgctgtcgtgccaccgcatctttgccgccgagaatccgaag
gcgaagatcggcctgccggaaatcatggtcggcatcttccccggcgcgggcggcacgacg
cggctggtgcggaagatgggcgcgatgatggcggcgccgttcctcttggaaggcaagctc
tccgacccgaaagccgcgaaagcggcggggatcatcgacgaggtctccgccgatccgatg
gccgccgcgcgggactgggtcttgaacgcgaccgaggccgatctggtcaagccctgggat
gccaagggctacaagatgcccggcggcgccccctatcaccccgcgggtttcatgacctat
gtcggcgcttccgccatggtgtcggcgaagacgatgggggtctatccggccgccaaggcg
ctgctgagcgcggtctatgaaggggcgctcgtgccctttgatcaggcgctgcggatcgag
gcgcgctggttcaccaaggtgctgatgaacccgtcctcgacggcgatgatccggtcgctt
ttcatcaacaaggaagcgctggaaaaaggcgcgaaccggcccaaggtcgccgatcagtcg
gtgaagaagctgggcgttctgggcgcgggcatgatgggggcgggcatcgcctatgtgtcg
gccaatgcgggcatcgaagtggtgctgatcgacgccagccaggaggcggccgagcggggc
aaggcctatgcgaccggcatcctcgacaagggcatccaaaggcgcaaggtgaccgaggcg
aaaaaggccgaggttctgggccgcatcaccgccaccaccgattacgcggcgctcgcgggc
tgcgatctggtcgtggaagccgtcttcgaagacccggccgtcaaggccgaggtgacggcg
aaggccgaggcggtgatccccgagaccgcgatctttgccaccaacacctcgaccctgccg
atttcgggtctggccaaggccagccaacgcccggcgcatttcatcggcatccatttcttc
agcccggtcgacaagatgaaccttgtcgagatcatcaagggcaaggacaccggcgaggtc
gccgtggcaaaggcgctcgatttcgtccgcgccatccgcaagacgcccatcgtcgtcaat
gacgcccgcttcttctacgccaaccgctgcatcatcccctatatcaacgagggcatccgc
atggtggccgagggggtgaacccggtcctgatcgagaatgcggcgaagctggtcggcatg
ccgctcggtccgctgcagctggtcgatgaaacctcgatcgatctcggcgtgaagatcgcc
aaggcgaccaaggccgcgatgggcgaggcctatcccgacggcgcggtcgatgcggtggtg
ttctggatggcggaacaggggcggcttggcaaaaaggccgatgcgggcttctacacctac
gacgcgggcaagcgcggcggcatgtgggaggggcttgcggcgcagtatcctcgcgcggcg
gcgcaacccgagctgagccatgtgcagcatcggctgctgatggtgcaggtgctggaggcc
gtgcgcgcctttgaacagggcgtcctgaccgatatccgcgaaggcgatgtcggcgcgatc
ctgggctggggctttgcgccctggtcgggcggccccttcgcctggctcgacattctgggc
gcggcccgggcggtcgagatctgcgacgcgctctcggcccgatacggcgcccgcttcgag
accccggcgctcttgcgcgacatcgccgccaagggcgacagtttccacgcccgtttcggc
ggcggcgcggcggcgaaagcggcctga
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