Rhodobacter capsulatus: RCAP_rcc02624
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Entry
RCAP_rcc02624 CDS
T01213
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RCAP_rcc02624 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcp01007
]
RCAP_rcc02624 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcp03016
]
RCAP_rcc02624 (lysS)
Enzymes [BR:
rcp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RCAP_rcc02624 (lysS)
Amino acid related enzymes [BR:
rcp01007
]
Aminoacyl-tRNA synthetase
Class I (A)
RCAP_rcc02624 (lysS)
Transfer RNA biogenesis [BR:
rcp03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RCAP_rcc02624 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1g
tRNA-synt_1c
tRNA-synt_1
tRNA-synt_1e
DUF903
Motif
Other DBs
NCBI-ProteinID:
ADE86354
UniProt:
D5AN64
LinkDB
All DBs
Position
complement(2815632..2817236)
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AA seq
534 aa
AA seq
DB search
MTTLRDAAMNSKAWPFEEARRVLKRYEKAPPKKGHVLFETGYGPSGLPHIGTFGEVARTT
MIRRAFEIISDIPTRLLCFSDDMDGMRKVPENVPQQELLYANIQKPLTAVPDPFGEFDSF
GNHNNAMLRRFLDTFGFEYEFASATDYYKSGKFDEMLMLCAERYDAIMAIMLKSLREERQ
QTYSCFLPIHPETGRVLYVPMKHVDAKNGLITFDDEDGREWTLPVTGGKVKLQWKPDFGM
RWAALDVDFEMYGKDHSTNTPIYDGICEVLGGRKPEHFTYELFLDDQGQKISKSKGNGLT
IDEWLSYAATESLSYFMYQKPKTAKRLWWDVIPKAVDEYHQQLRAYPTQPVEKQIDNPVW
HIHGGQPPESNLVVPFAMLLNLASVAGASDKAGLWGFIKRYAPEATPETHPDLDAAAGFA
VRYFHDFVAPTRTFRLPSDKERAAMEDLLARLKALPATDLHLQFEDPSEGLQTIVFAVGT
EHGFEPLRDWFTALYEVLLGQSQGPRFGGFIALYGVSETIALMETALAGGLIKA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccctgcgcgacgctgcgatgaactccaaagcctggcctttcgaggaagcgcgt
cgggtgctcaaacgctacgaaaaggcgccgccgaaaaagggccatgtgctgttcgagacc
ggctatggcccgagtgggctgccgcatatcggcacctttggcgaggtcgcgcgcacgacg
atgatccgccgcgcgtttgaaatcatctcggacattccgacgcggcttttgtgcttttcc
gacgacatggacggcatgcgcaaggtgcccgaaaacgtgccgcagcaggagctgctttac
gcgaatatccaaaagccgctgaccgccgtgcccgatccgttcggcgaattcgacagcttc
ggcaatcacaacaacgccatgctgcgccggtttctggacacgttcgggttcgaatatgaa
ttcgccagcgcgacggattattacaagtccggcaagttcgacgagatgctgatgctttgc
gccgaacgctatgacgcgatcatggcgatcatgctgaaatcgttgcgcgaagaacgtcag
cagacctattcctgcttcctgccgatccatccggaaaccggccgcgtgctttacgtgccg
atgaagcatgtcgatgcgaagaacgggctgatcacctttgacgacgaggacggccgcgaa
tggacgctgccggtgacgggcggcaaggtgaagctgcagtggaagcccgatttcggcatg
cgctgggcggcgctggatgtcgatttcgagatgtatggcaaggaccattcgaccaacacg
ccgatttatgacggcatttgcgaggtcttgggcggcaggaagcccgagcatttcacctat
gagctgttcctggatgatcaggggcagaagatttccaagtcgaagggcaacgggctgacg
atcgacgaatggctgagctatgcggcgaccgaaagcctgtcctatttcatgtatcaaaag
ccgaagacggcgaagcggctgtggtgggatgtgatcccgaaagcggtggatgaataccat
cagcagctgcgcgcctatccgacgcagccggtcgagaagcagatcgacaacccggtctgg
cacattcacggcggccagccgcccgagtcgaacctggtggtgccctttgcgatgctgctg
aacctcgcctcggtggcgggggcaagcgacaaggccgggctttggggcttcatcaagcgc
tatgcgcccgaggcgacgcccgaaacccaccccgatctggacgcggcggcgggctttgcg
gtgcgctacttccatgatttcgtcgcgccgacccggaccttccggctgccctccgacaag
gaacgcgcggcgatggaggatctgttggcacggctgaaggcgctgcccgcgaccgacctg
catctgcaattcgaggacccgtccgaggggctgcagacgatcgtcttcgccgtcggcacc
gaacacgggttcgagccgctgcgagactggttcaccgcgctttacgaggtgctcttgggc
caaagccaggggccgcgctttggcgggttcatcgcgctttatggcgtcagcgaaaccatc
gcgctgatggaaaccgcgctggcgggcgggctgatcaaggcctga
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