Rhodococcus coprophilus: NCTC10994_00223
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Entry
NCTC10994_00223 CDS
T06666
Symbol
polA_1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr03030
DNA replication
rcr03410
Base excision repair
rcr03420
Nucleotide excision repair
rcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10994_00223 (polA_1)
03410 Base excision repair
NCTC10994_00223 (polA_1)
03420 Nucleotide excision repair
NCTC10994_00223 (polA_1)
03440 Homologous recombination
NCTC10994_00223 (polA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcr03032
]
NCTC10994_00223 (polA_1)
03400 DNA repair and recombination proteins [BR:
rcr03400
]
NCTC10994_00223 (polA_1)
Enzymes [BR:
rcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10994_00223 (polA_1)
DNA replication proteins [BR:
rcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC10994_00223 (polA_1)
DNA repair and recombination proteins [BR:
rcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC10994_00223 (polA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10994_00223 (polA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
LAMTOR
Motif
Other DBs
NCBI-ProteinID:
SQI28478
UniProt:
A0A2X4U0D4
LinkDB
All DBs
Position
1:232910..235636
Genome browser
AA seq
908 aa
AA seq
DB search
MTRAASSSTTPTADADARPTLLLLDGHSLAFRAFYALPAENFKTHSGQTTNAVYGFTSML
INLLRDEQPTHVAAAFDVSRKTFRAELFAAYKAQRSAAPDEFKGQIELTKDVLGAMGIPV
MAIEGYEADDLIATLATQANALGYKVLVVTGDRDALQLVNDDITVLYPRRGVSDLTRFTP
EAVEEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIREFGSLSGLVDRVDEVR
GKTGDALRENLSNVLLNRQLTEMVRDVALPYSPDQLALAPWDRDRIHRLFDDLEFRVLRD
RLFETLASAAPEAEEGFEVRGGIVEPGALGDWLATHAVAGQRHGLSVVGPGTPYGGEATA
IAIAAADGDGAYVATIALTPEDDAALAAWLADPTVEKALHEAKSAIHALRGRGWTIAGLT
SDTALAAYLVRPGQRSFKLDDLSLRYLKRELRAENDGDGQLSLLDDADAVDEQAAQTQIL
AARAVVDLAAALDAELADIESVALLSEMELPLLEVLADIEATGIAVDADHLYDLQSGFAA
DVAAAANAAYEVIGKQINLGSPKQLQVVLFDELDMPKTKKTKTGYTTDADALQGLFDKTG
HPFLEHLLAHRESTKMKTTVDGLIKSVADDGRIHTTFNQTVAATGRLSSTEPNLQNIPVR
TDAGRQIREGFVVGEGFDMLLTADYSQIEMRIMAHLSGDEGLIEAFRTGEDLHSFVASRA
FGVPLDEVTPELRRRVKAMSYGLAYGLSAYGLAQQLKISAEEARAQMEAYFTRFGGVRDY
LHNVVEEARKVGYTSTLYGRRRYLPDLNSDNRQRREVAERAALNAPIQGTAADIIKVAMI
DVQRALRAADLRSRMLLQVHDELVLEVVDEEREQVEAIVREKMDSVIELSVPLEVSVGYG
RSWDAAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgtgctgcatcttcctcgactacgcccaccgcggacgccgacgcccgcccgacc
cttctcctcctcgacggacactctctggcgttccgcgccttctacgcgctgccggcggag
aacttcaagacccacagcgggcagaccaccaacgcggtgtacgggttcacctccatgctc
atcaacctgctccgcgacgaacagcccacacatgtcgccgcggcgttcgacgtcagccgc
aagacgttccgcgcagagttgttcgccgcgtacaaggctcagcgcagcgccgcacctgac
gagttcaagggacagatcgaactcaccaaggacgtgctcggcgcgatgggcatacccgtc
atggcgatcgagggctacgaggccgacgacctcatcgccaccctcgcgacccaggcgaat
gcgctcggatacaaggtgctcgtggtgacgggcgaccgcgacgcgctccagctcgtcaac
gacgacatcaccgtgctgtatccgcggcgcggtgtctccgacctcacccgcttcaccccc
gaggccgtcgaggagaagtacggcctgaccccggcgcagtacccggacttcgctgcgttg
cgcggcgacccgagcgacaacctgcccggtatcccgggtgtcggagagaagaccgccgcg
aagtggatcagggagttcggcagtctcagcggtctcgtcgaccgggtcgacgaggtgcgc
ggcaagaccggcgatgcactccgcgagaacctgtcgaacgtgctgctcaaccggcagctc
accgagatggtgcgcgacgtggcgttgccgtactccccggatcagctcgcgctggctccc
tgggatcgtgaccgcatccaccgtctgttcgacgacctcgaattccgggtgctgcgagat
cggctgttcgaaacgctcgcctccgccgcgcccgaagccgaagaaggcttcgaggtacgc
ggcgggatcgtcgagcccggcgctctcggcgactggctcgcgacacatgccgtcgcgggg
cagcgtcacgggttgtcggtcgtcggaccgggaacgccgtacgggggagaggccaccgca
atcgcgatcgcagcggccgacggtgacggcgcctacgtcgcgaccatcgcgctgacaccc
gaggatgacgcggccctcgcggcatggcttgccgacccgaccgtcgaaaaagcgttgcac
gaagcgaaatccgcgattcacgccctgcggggtcgtggctggacgatcgccggcctcacc
agcgacaccgccctcgccgcctacctcgttcggccggggcagcgcagcttcaaactcgac
gacctgtcgctgcggtacctcaagcgcgaactgcgggccgagaacgacggcgacggtcag
ttgtctctgctcgacgatgcggacgctgtcgacgagcaggccgcgcagacccagatcctt
gccgcccgcgcggtcgtcgacctggctgcggcgctcgacgcggaactggccgacatcgaa
tcggtggcattactctccgagatggaactgccgctgctcgaggtgctcgccgacatcgag
gccaccggtatcgccgtcgacgccgaccacctctacgacctgcagtccgggttcgcggcc
gacgtcgccgccgcggcgaacgccgcctacgaagtgatcggcaagcagatcaatctcggt
tcaccgaagcagttgcaggtcgtgctcttcgacgaactggacatgcccaagacgaagaag
accaagaccgggtacaccaccgacgccgacgcgctgcagggcctgttcgacaagaccggc
cacccgttcctggaacatcttctcgcacaccgggaatcgaccaagatgaagaccaccgtc
gacgggctgatcaagtcggtggccgacgacggcaggatccacaccacgttcaaccagacg
gtcgcggcgaccggccggctgtcatcgaccgaaccgaacctgcagaacattccggtgcgc
accgacgccggccggcagatccgcgagggcttcgtcgtcggtgaggggttcgacatgctg
ctcaccgccgactacagccagatcgagatgcgcatcatggcgcacctctcgggtgacgaa
ggtctgatcgaggccttccgcacgggagaggacctccattcgttcgtcgcctcgcgcgcg
ttcggtgtcccgctcgacgaggtcaccccggaactgcggcggcgggtcaaggccatgtcc
tacggtctggcctacggtctgagcgcgtacggtctcgcacagcagctcaagatctccgcg
gaagaggcgcgcgcacagatggaggcgtacttcacccggttcggtggggtgcgcgactat
ctccacaatgtggtcgaggaagcccggaaggtcggctacacctcgacgctctacgggcgg
cgccggtacctgccggacctcaacagcgacaaccggcagcgccgggaggtggccgagcgc
gcggcgctcaacgccccgatccagggcaccgccgccgacatcatcaaggtcgcgatgatc
gatgtgcagcgcgccctgcgcgcggcggacctacgttcgaggatgctgctccaggtgcac
gacgagctcgttctcgaggtcgtcgacgaggaacgcgagcaggtcgaggcgatcgtgcgg
gagaagatggactccgtgatcgaattgtcggtgcccctcgaggtgtcggtcggctacggc
cgcagctgggacgccgccgcccactga
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