Rhodococcus coprophilus: NCTC10994_03350
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Entry
NCTC10994_03350 CDS
T06666
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein cobd
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr00860
Porphyrin metabolism
rcr01100
Metabolic pathways
rcr01240
Biosynthesis of cofactors
Module
rcr_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NCTC10994_03350 (cobD)
Enzymes [BR:
rcr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
NCTC10994_03350 (cobD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
SQI36475
UniProt:
A0A2X4X9Q8
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All DBs
Position
1:complement(3620678..3621610)
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AA seq
310 aa
AA seq
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MRAAGLVLGYVADRVFGDPRRWHPVSGFGKVARCAERTMYADNRSAGVAFTVLLVGSTGL
LGWTADRATRSRPLLNTAVTAFATWMVLGGRSLGTEARALDRQLRRGDLAAARVQVTHLV
GRDPSQLEANDIARATIESVAENTSDAVVAPLLWGAVLGPAGLLGYRAANTLDARVGHRT
PRLERFGWASARLDDVLNLAPARLTALLAAAMGGNPGAALRTWRRDAHKHPSPNAGPVEA
AFAGALGITLGGANVYHGVVEDRGTLGDGPAPGPADIGRTARLAARVGAGALISTVAPVV
AVRIAVRARR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagggcagcagggttggtgctggggtacgtcgccgaccgggttttcggtgatccgcgg
cggtggcatcccgtgagcgggttcggaaaagtcgcgcggtgtgccgaacgaacgatgtat
gccgacaaccgcagcgccggagttgcattcacagtcctactcgtcggctccaccgggctg
ctgggctggaccgccgaccgggccacccgatcccgccctctgctcaacaccgcggtcact
gcattcgcaacctggatggtgctcgggggtcgatccctcggcaccgaggcgcgcgccctg
gaccgccagttgcggcgcggcgacctcgccgcggcacgggtgcaggtcacgcatctcgtc
ggccgcgacccctcacagctcgaagcgaacgacattgcccgcgcgacaattgaatccgtc
gccgagaacacctcggatgccgtcgtggcaccactcctctggggagcggttctcggtccg
gccggactgctcggctatcgcgcagcgaacacgctggacgcccgggtcgggcaccgcacc
ccccgcctggaacgattcgggtgggcatcggcgcgactcgacgatgtactcaacctcgcc
ccggctcggctgaccgcgctgctggccgcggcaatgggtgggaaccctggtgcggcactc
cgcacatggcgacgggacgcgcacaaacacccgagtccgaatgccggtcccgtcgaggcg
gctttcgccggggcgctcggaatcacgctcgggggagcgaacgtctatcacggagtcgtc
gaggaccgcgggacgctgggcgacggcccggcacccggcccggcggatatcggtagaacc
gcgcgtctcgcagcacgggtaggtgcgggagcactgatttcgaccgttgcgccggtcgtc
gctgtgcggattgcggtgcgcgcacgccggtga
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