KEGG   Ricinus communis (castor bean): 8258795
Entry
8258795           CDS       T01087                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03020  RNA polymerase
rcu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8258795
  09124 Replication and repair
   03420 Nucleotide excision repair
    8258795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcu03021]
    8258795
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8258795
Transcription machinery [BR:rcu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     8258795
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      8258795
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD IBR Rpr2 Zn_ribbon_recom Elf1 DZR zinc_ribbon_4 GH123_cat DNA_RNApol_7kD
Other DBs
NCBI-GeneID: 8258795
NCBI-ProteinID: XP_015574699
LinkDB
Position
9:complement(1224186..1225218)
AA seq 127 aa
MLASLLLKHTTSEMSVYKFCPDCNNVLYPKEDRKQRILLYACRNCEHQEVADSNRVYRNE
IHHSVSEHTQILQDVASDPTLPRTKSVRCSACGHGEAVFLQATSREEGMTLFYVCCNPNC
GNRWRDY
NT seq 384 nt   +upstreamnt  +downstreamnt
atgctagctagcttgcttttgaagcacaccacttcagaaatgagtgtgtacaagttttgc
cccgactgtaacaacgtcctctaccctaaggaagacaggaagcaaaggatccttctctat
gcatgtcgaaactgcgagcaccaggaggttgctgatagtaatcgggtatacagaaatgag
atacaccactctgtttcagaacacacacaaatactgcaggatgtagcctcagatccaact
ctacctcgtactaaatcagttcgttgtagtgcatgtggccatggggaagctgtcttctta
caagcaacttctagggaggagggtatgacactgttttacgtttgctgcaatccaaattgt
ggcaatcgatggagagattattga

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