Ricinus communis (castor bean): 8262022
Help
Entry
8262022 CDS
T01087
Name
(RefSeq) farnesyl pyrophosphate synthase 1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00900
Terpenoid backbone biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
8262022
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcu01006
]
8262022
Enzymes [BR:
rcu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
8262022
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
8262022
Prenyltransferases [BR:
rcu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
8262022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
8262022
NCBI-ProteinID:
XP_048226079
LinkDB
All DBs
Position
10:2800516..2806858
Genome browser
AA seq
342 aa
AA seq
DB search
MADLKSTFLNVYSILKKQLLEDPAFEWTPDSREWVNRMLDYNVPGGKLNRGLSVIDSYQL
LKEGQELTEEEIFLASALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAN
DGVLLRNHIPRILKNHFRGKAYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTL
SLHRRIVQYKTAYYSFYLPVACALLMAGENLDDHIDVKNILVDMGIYFQVQDDYLDCFGD
PKTIGKIGTDIEDFKCSWLVVKALELCNDEQKKVLHENYGKADPECVTKVKVLYNELNLQ
GVFTDYENKSYEKLVTSIEAHPSKAVQAVLKSFLAKIYKRQK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctgaagtcaacgttcttgaatgtctattctattctcaagaaacagcttctt
gaagacccggcttttgaatggactcctgattcccgtgaatgggttaaccggatgttggac
tacaatgtgcctggagggaagctgaatagggggctctctgtgattgatagctaccaattg
ttgaaagaaggacaggaattaactgaagaagaaatctttcttgcaagtgctcttggttgg
tgtattgagtggcttcaagcttattttcttgtccttgatgacattatggatggctctcat
acaagacgtggtcagccttgttggtttagggtacccaaggttggtatgattgcagcaaat
gatggggttttacttcgaaatcatattcccaggattctcaagaaccactttcgagggaag
gcatactacgtagatcttctagatttgtttaatgaggtcgagttccaaacagcctcagga
cagatgatagatttgatcacaacactagaaggagaaaaggatttatccaaatacactttg
tcacttcaccggcgaattgttcagtacaaaactgcctactactcattttaccttcctgtt
gcttgtgcattgctcatggcgggtgagaatctggatgaccatattgatgtaaagaacatt
cttgtggatatgggaatctacttccaagtacaggatgattatttggattgctttggtgat
cccaagacaattggtaagataggaacagatattgaagattttaagtgctcttggctggtg
gtaaaggctttggaactttgcaatgatgaacaaaagaaagtgttacatgaaaactatggc
aaagctgacccggagtgtgtaacaaaggtgaaagtcctttacaacgagctgaatcttcag
ggggtatttaccgactatgagaacaaaagctatgagaaactagtaacctccattgaagct
catcctagcaaggcagtgcaagcagtgttgaagtctttcctggcaaaaatttacaagaga
cagaaataa
DBGET
integrated database retrieval system
