Ricinus communis (castor bean): 8271089
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Entry
8271089 CDS
T01087
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00900
Terpenoid backbone biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
8271089
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcu01006
]
8271089
Enzymes [BR:
rcu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
8271089
Prenyltransferases [BR:
rcu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
8271089
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Ta1207
Motif
Other DBs
NCBI-GeneID:
8271089
NCBI-ProteinID:
XP_002530137
UniProt:
B9SVW8
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All DBs
Position
9:25535747..25546633
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AA seq
417 aa
AA seq
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MLLSRGLSRISRNGYRHCFLSRGLDRPFLLSNTSHYLGRSTPKVLNHRETYSWSLSTLYG
FKQQIHHQSSSLIEDQLDPFSLVADELSLLANKLRSMVVAEVPKLASAAEYFFKMGVEGK
RFRPTVLLLMATALNVHIPEPTPTGVGDVVATELRARQQSIAEITEMIHVASLLHDDVLD
DADTRRGIGSLNFVMGNKVAVLAGDFLLSRACVALASLKNTEVVSLLATVVEHLVTGETM
QMTSTSEQRCSMEYYMQKTYYKTASLISNSCKAIALLAGQTAEVAMLAFEYGKNLGLAFQ
LIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEEFPQLRAVVDRGFDKPGNVDIAL
EYLGKSRGIQRTRELAAKHANLAAAAIDSLPETDDEEVRKSRRALVDLTQRVITRNK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttactctcacgagggttgtcccggatttcaagaaacgggtatcgtcattgttttctt
tctcgtggactagaccgccctttccttctttctaacacttcccactatcttggacgctct
actccaaaggttttaaatcatagagaaacttattcctggagtttatctacactgtacggc
ttcaaacagcagattcatcatcagagcagctcattgattgaggatcaacttgacccattc
tcacttgtcgctgatgaactatcgctacttgcaaataagttgcggtcgatggtggttgct
gaggttcccaaactcgcctcagctgctgagtacttcttcaagatgggagtagaaggaaag
cgatttcgtcccactgttttgttactgatggcaacagctttgaatgtgcacatacctgaa
ccaacaccaactggagttggagatgttgtggcaacagagctacgtgcaagacaacagagc
atagctgaaatcacagaaatgatccatgtggcaagtcttcttcatgacgatgtgttggat
gatgcagacactaggcgtggtattggttcactaaattttgttatgggcaataaggtagca
gtattagctggggattttctcctttcacgagcttgtgtagcccttgcttctttgaaaaac
acagaggtggtttcacttttggcaacagttgtagaacatcttgttactggcgaaaccatg
cagatgactagtacatctgagcaacgttgtagtatggagtattatatgcaaaagacatac
tacaagactgcatctttgatttcaaacagctgcaaagcaattgcacttctggccgggcaa
acagcagaagttgcaatgttggcttttgagtatggcaaaaatctgggattggcatttcag
ttaatagatgacgtccttgatttcacaggcacatctgcttcccttggaaagggttcatta
tctgacattcgacatggaattgtgactgctccaatactgtttgcaatggaggagttcccc
caattacgtgcagttgttgaccggggctttgacaaacctggaaatgttgatattgcccta
gagtaccttggaaagagccggggaatacaaaggacaagggagttagctgcgaagcatgct
aaccttgctgcagcagctatcgattcactcccggaaactgatgatgaagaagtaagaaag
tcaaggagggcactagtagatctcacacaaagagtaatcacaagaaataagtga
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