Ricinus communis (castor bean): 8271540
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Entry
8271540 CDS
T01087
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00906
Carotenoid biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
8271540
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcu01006
]
8271540
Enzymes [BR:
rcu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
8271540
Prenyltransferases [BR:
rcu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
8271540
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
8271540
NCBI-ProteinID:
XP_002527067
UniProt:
B9SM48
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All DBs
Position
9:complement(23904184..23906565)
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AA seq
385 aa
AA seq
DB search
MSSTFSLAAKPCIKGNDSKFLHAKSVVTRAKAQVITAPKQSDTSAFPQLLTQRILHTDIH
VRQIVERQSQADCLLAQQDPCRKPEFHPLFLEEAYARCKNICAEYAKTFYLGTLLMTEER
QKAIWAIYVWCRRTDELVDGPNAGYMSSAVLDRWEERLQNIFDGQPYDMLDAALTDTVFR
FPLDIKPFMDMIEGMRMDTKKCRYEDFEELYRYCYYVAGTVGLMSVPVMGIAPEACVSAQ
TIYSAALNLGIGNQLTNILRDVGEDAMRGRVYLPQDELAQFGLRDEDVFGGKVTDRWREF
MKEQITRARYYFNLAEEGASQLDKASRWPVWSCLILYREILDAIEDNDYDNLTKRAYVGR
TKKLLTLPLAYTKAQSPPSLILQYH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagctctacattttcactagcagctaagccttgcattaaaggaaacgatagcaaattc
ttgcatgcaaaatctgtagttacaagagctaaagctcaagtgatcacagctccaaaacaa
tcagacacaagtgcttttcctcagttactgacacaaaggattcttcacactgatattcat
gtgcgccaaatagttgaaaggcagtctcaagctgactgcttattagcccagcaagatccc
tgtagaaagccagaattccaccctttgtttcttgaagaagcttatgcaagatgcaaaaac
atttgtgctgaatatgccaagactttctatctagggacattgctgatgacagaggagcga
cagaaagccatatgggcaatttatgtttggtgtaggagaacagatgaactggtggatgga
ccgaatgcagggtacatgagctcagctgttcttgacagatgggaagagagactgcaaaac
atctttgatggacagccttatgacatgcttgatgctgcactgacagatactgttttcagg
ttccctctagacattaagcctttcatggacatgattgagggtatgagaatggatacaaag
aaatgtaggtacgaggattttgaagagttgtatcgttactgctactatgttgctggcact
gtcggccttatgagtgttcctgtaatgggaatagcaccggaagcttgtgtttctgctcag
acaatctatagtgcagctctcaacttgggtatcggaaatcagcttactaacattctcaga
gatgtaggagaggatgctatgagaggaagagtttatcttccacaagatgagcttgcgcag
tttgggctgcgtgacgaggatgtttttggtggaaaggtaactgatagatggagggagttc
atgaaggagcaaattacaagggcaagatactacttcaaccttgctgaggaaggagcctct
cagctagacaaagctagccgttggccggtatggtcatgcttaatcctgtacagagaaatc
ttggatgcaattgaggataatgattatgataacttgacaaagagagcttatgttggaagg
actaagaagcttctcacattgcccttagcatacactaaagctcaatccccaccaagtttg
attcttcaataccattga
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