Ricinus communis (castor bean): 8273629
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Entry
8273629 CDS
T01087
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
8273629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8273629
Enzymes [BR:
rcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
8273629
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
8273629
FA (Fanconi anemia) pathway
Downstream FA components
8273629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Yippee-Mis18
AGOG
Voldacs
Motif
Other DBs
NCBI-GeneID:
8273629
NCBI-ProteinID:
XP_015575962
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All DBs
Position
2:433032..443083
Genome browser
AA seq
1263 aa
AA seq
DB search
MVAANTVSNNPNPKSKNAYHIGGIQVEFPYQPYGPQLAFMGRVISTLDRAVRDGHCHALL
ESPTGTGKSLSLLCSTLAWQQNYKSKQQLADLTQSKPNPEAITDPIGHGGGFIPETQPSS
IPPSGNLEAAQPAAVSKTQKKKAAPTIFYSSRTHGQITQVIREYRKTAYRVPMAVLASRR
HYCTNAHVNGKENIDEECKLLLKDPDAGCLQFKNAHKVKGHPSLQRGGCHEVHDIEDLVK
VGKVVRGCSYYAARSMADDAQLVFCPYNYVINPVIRGAMEIDIRGAILILDEAHNIEDIA
RDAGSVDVEEDILYKLQTELEQLCVHNTSIYQPLYEMTQDLLSWIDQRKSTLQKHGFQHY
FSSWSGDKALRELQEANISQQCFPILLDCALKAIKAATDTEPDIAHLSGMAVIVLEGLFS
SLTYFFSRNGCHVSDYQLALQRHIKRDRKSPVGEWTLTLSLWCLNPAVVFRDIADLSLSV
ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDNESQVWAAVISTGPDNYPLNASYKTADE
FAFQDALGKTLEEICMIVPAGSLVFFPSYKLMEKLCNRWRETGQWSRLNAKKSLFVEPRG
SQEEEFDSVLKGYYDSICKCNTHAVGRKKRVKRLDLKKAVESTENLGKGAAFLAVCRGKV
SEGMDFSDDNARVVIVVGIPFPNILDIQVRLKKSYNDTYKTSKNLLSGNEWYCYQAFRAL
NQAIGRCIRHRFDYGAIILLDERYKKEQNRMYISKWLRKSICQYDSYSMSIEGLKSFFRD
VKENIGKKMVDQLPNSETEGQKISPREPANGFTRKKNQKLNKSDNCAGKLVSSMKCNAIS
HLKSQDYIEQSYMQIDQDIDSRREITDVERDFPKESRFLEESSQEDPEMTLVKETPGMGF
NGTTASSGSFSKDGNSSLTMIQASVEHTDQESSYSVSLTNASKDPGKACCSLAVTPKKDF
NANTCSLIPEAESTLNLSVNSHTQKKRQPIGLPFINLVEGPDSPDMESPGCFRSTTDTMA
SKDANRRIEFDLATDSAEHQSMESKAPRVLPTNNCAPSSINSDPVMDQKLQISCSLCKSP
LGLPENQLYVRCSLTSTSKIHLTSLGKERFEYCSNNTKSVPVLMADIASVDQRLYNITLK
DNPGRGVWCEEDGCVFNSIYCPFCSSSNCLGVQIMATDASNVQLLNKILFYFDGLEIQNL
EASTDRASKQKEVHSPSMDKTAAFNSIDRFSYSPHQNSGGWRTTRPKLKLPKRDRLLNGQ
SQN
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctgcaaatacggtgagcaataatccaaaccctaaatccaaaaatgcataccac
attggaggtatccaagtggaattcccgtaccagccgtatggtcctcagctggctttcatg
ggtagagtgatttccacgctggatcgagccgtaagagacggccattgccatgcgctactc
gagtcacccaccggtactggaaaatcactctcgcttctttgttccactctcgcgtggcaa
cagaattataagtctaagcaacagctcgcggatcttactcaatccaaacctaatcccgag
gcaatcactgatcctataggtcatggcggtggatttattcctgaaacgcaaccctcaagt
attccaccttcaggaaacctggaggcagctcaacctgctgcagttagcaaaactcaaaag
aaaaaggctgcaccgactatattttactcttcgaggacacatggacaaattactcaagtg
attcgtgaatatcggaagactgcatatagggtgcccatggcagtgttggcttcaaggaga
cattactgcacaaatgcacacgtaaatgggaaggaaaatattgatgaagaatgcaaactt
ctcttgaaagatccagatgctgggtgcttacaattcaaaaatgcacataaagttaaaggt
catccatcgcttcaaaggggaggttgtcatgaggtccatgatattgaagatcttgtcaaa
gttggaaaagttgttagaggctgttcatattatgcagctcgctcaatggcagatgatgca
cagttagttttctgcccatacaactatgtaataaatccagtcatccgaggagcaatggaa
atagacattagaggggccattcttattctcgatgaagcccacaatatagaagacattgcc
cgtgatgctggtagtgtggatgttgaagaagatattctatataaattgcagacggaatta
gagcaactttgtgtacacaatacctcgatttaccaaccattatatgaaatgacacaggat
ctgctaagttggattgaccaaaggaaaagcacattgcagaagcatggttttcagcactac
ttctctagttggagcggtgataaggctttgagggagctccaagaggctaatatttcacaa
cagtgcttcccaatcttgctggattgtgccctaaaggcaattaaagctgcgacagataca
gaaccagacatagctcatttaagtggcatggcagtgatagtgttggaagggttattttcc
tcacttacttatttcttctcgagaaatggttgccatgtatccgactatcaacttgcattg
caacggcatattaagagagatagaaaaagtcccgttggtgaatggacgctaactctaagc
ttatggtgcttgaatcctgctgttgttttcagagatattgctgatctttctttgtcagta
attttaacttcagggactctatcaccgatgaattccttttcatctgagcttggagttcag
tttggaacttgtttggaagcgccacatgtaattgacaatgaatcacaagtgtgggctgct
gtaatatccactggtccagataattatccactgaatgcaagttacaaaacagcagatgag
tttgctttccaggatgcacttggtaaaactttggaggaaatttgcatgattgttccagct
ggctctcttgtgttcttcccaagttataaactgatggaaaaactgtgtaatcgttggcgt
gaaactggtcaatggtctcgactgaatgcaaaaaagtcactctttgttgaaccaagagga
agccaagaggaggaatttgactctgttttaaagggttattatgactcgatttgtaaatgc
aacacacatgctgttggaagaaagaaaagagtcaaaaggttggaccttaaaaaggctgta
gaatccacagaaaatttaggaaaaggagctgcttttcttgctgtttgccggggcaaggtc
tcagaaggaatggacttttctgatgataatgctcgagttgttatagtagttggtatccca
tttccaaacatacttgatattcaagttcgcctaaagaagagctataatgatacatacaag
acgtccaaaaaccttcttagtgggaatgaatggtattgctaccaagcattccgagctttg
aatcaagctataggacgctgtatacgacataggtttgactatggggccatcatcctacta
gatgaacgttataagaaggagcagaacagaatgtacatttcaaagtggctaagaaaatca
atttgccagtacgatagttatagcatgtcaatagaggggttaaaatcctttttcagggat
gtcaaggaaaacataggcaagaagatggttgatcaattaccaaattctgaaactgagggg
caaaagatctcgcctagagaacctgccaacgggtttacaaggaaaaaaaatcagaaactg
aacaagtctgataattgtgcagggaaactagtctcctcgatgaagtgcaatgccatctct
catcttaagtcccaagattacattgaacagtcatatatgcaaatagatcaggatattgac
agtcggagagaaattactgatgtagaacgtgattttccgaaagagtcaaggttcttggag
gaatcttcccaggaagatccagagatgacccttgttaaagaaaccccgggaatgggcttc
aatggtacaacagctagttcaggttccttctcaaaggatgggaattctagtttaaccatg
attcaggcctctgttgagcatacggaccaggagtcatcttattcagtgtctctaacaaac
gcaagtaaagatcctggcaaagcctgctgttcattggcagtaactcccaagaaagacttc
aatgcaaacacctgcagcctgataccagaagctgagtctactcttaatttgagtgttaat
tctcatacacagaaaaagaggcagcccataggcttgccatttattaaccttgttgaagga
cctgattcccccgatatggaatctcctggctgttttagatccacaactgatacaatggcc
agtaaagatgcaaatcgcaggattgaatttgatttggcgactgactctgcagaacaccag
tccatggaatcaaaagcgccacgagtcctcccaacaaataattgtgctccatcaagcatc
aattctgatcctgtcatggatcagaaattacaaatttcttgttcactctgcaaaagtcca
ttgggtcttcctgaaaatcaattatatgtcagatgctcattgacttcgacatcaaaaatt
cacttaacgtctctaggaaaagaaagatttgaatattgcagcaacaatacaaaaagcgta
cctgttctcatggctgatattgcatcagtagatcagcgtctttacaatattactcttaaa
gataatccagggcgaggggtttggtgcgaagaagatgggtgtgttttcaattctatctat
tgcccgttctgcagcagttctaattgccttggagtacaaatcatggcgactgatgcatca
aatgttcaattacttaataagatattgttttattttgatggtctggaaattcagaatctg
gaagcatcaacagacagagcatcaaagcaaaaggaagttcatagcccaagcatggataaa
actgctgcttttaactccattgatagattctcatactccccgcatcagaattctggaggt
tggaggactacaaggccaaagctgaaactaccaaagagagaccggcttttgaacggacaa
agtcaaaattga
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