Ricinus communis (castor bean): 8284004
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Entry
8284004 CDS
T01087
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8284004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcu02000
]
8284004
04147 Exosome [BR:
rcu04147
]
8284004
04090 CD molecules [BR:
rcu04090
]
8284004
Enzymes [BR:
rcu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8284004
Transporters [BR:
rcu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8284004
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8284004
CD molecules [BR:
rcu04090
]
Proteins
8284004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
AAA_16
AAA_29
RsgA_GTPase
AAA_15
nSTAND1
AAA_5
APS_kinase
DUF815
DUF87
Rad17
Motif
Other DBs
NCBI-GeneID:
8284004
NCBI-ProteinID:
XP_002519488
UniProt:
B9S0G9
LinkDB
All DBs
Position
10:complement(14917748..14924805)
Genome browser
AA seq
1352 aa
AA seq
DB search
MSQESEEIKTIEQWKWSEMQGLELVSSAPSNPSSSDPFKTNSTSNSHYSISQQQQEQNHQ
DTVPETKDMDNNKKDSNGSGEKQGDVATVGFCELFRFADSLDYVLMAIGSIGALVHGSSL
PLFLRFFADLVNSFGSNANDMDKMMQEVLKYAFYFLIVGAAIWASSWAEISCWMWTGERQ
STKMRIKYLEAALNQDIQYFDTEVRTSDVVFAINSDAVMVQDAISEKLGNFLHYMATFVS
GFVVGFTAVWQLALVTLAVVPLIAVIAAIHTNTLAKLSGKSQEALSQAGNIVEQTIVQIR
VVMAFVGESRALQGYSSALRVAQRIGYKSGFAKGMGLGATYFVVFCCYALLLWYGGFLVR
HHYTNGGLAIATMFAVMIGGLALGQSAPSMGAFAKAKAAAAKIFRIIDHKPAVDRNSESG
LKLDSVTGLVELKNVDFSYPSRPDVKILNNFTLNVPAGKTIALVGSSGSGKSTVVSLIER
FYDPNSGQVLLDGHDIKTLDLRWLRQQIGLVSQEPALFATTIKENILLGRPDADQIEIEE
AARVANAHSFIAKLPEGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALD
SESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVTEIGTHDELIAKGDNG
VYAKLIRMQETAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTS
DFSLSLDATHPNYRLEKLPFKEQASSFWRLAKMNSPEWVYALVGSIGSVVCGSLSAFFAY
VLSAVLSVYYNPNHAYMSREIAKYCYLLIGLSSAALIFNTLQHSFWDIVGENLTKRVREK
MLAAVLKNEMAWFDQEENESARIAGRLALDANNVRSAIGDRISVIVQNTALMLVACTAGF
VLQWRLALVLIAVFPLVVAATVLQKMFMTGFSGDLESAHAKATQLAGEAIANVRTVAAFN
SESQIVGLFATNLQAPLRRCFWKGQIAGSGFGIAQFSLYASYALGLWYASWLVKHEISDF
SKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDADATAVPDR
LRGEVELKHVDFSYPTRPDVPIFRDLNLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS
SGRVMIDGKDIRKYNLKSLRKHIAIVPQEPCLFATTIYENIAYGHESATEAEIIEAATLA
NAHKFISGLPDGYKTFVGERGVQLSGGQKQRIAIARALVRKAELMLLDEATSALDAESER
SVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHTHLLKNYPDGCYARM
IQLQRFTHSQVIGMTSGSSSSARPREDEEREA
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagagtctgaagagataaagacgattgagcagtggaaatggtccgaaatgcaa
ggccttgaactcgtgtcttctgctccttctaatccttcttcttctgacccttttaaaacc
aactcaacatctaactcgcactactctatatcacaacaacaacaagaacaaaaccatcaa
gacactgtacctgaaacaaaagatatggataacaataagaaagatagcaatggtagtgga
gagaagcaaggggatgttgccacagttggtttctgtgagctatttagatttgctgatagt
ttggattatgttttgatggcaattgggtctattggtgcattagtacacggctcttctttg
ccactttttcttcggttctttgccgatcttgttaactcttttggttctaatgcgaatgac
atggataagatgatgcaagaagttttgaagtatgcattttactttctcattgttggtgct
gcaatttgggcatcttcctgggcagagatatcgtgttggatgtggactggagagaggcaa
tcaacaaagatgaggatcaagtacttagaagcagctctaaaccaagacattcagtacttc
gacactgaggttcggacctccgacgtcgttttcgctattaacagtgacgctgtaatggtc
caagatgccattagtgagaagttgggcaattttcttcactatatggcaacttttgtgtct
ggatttgtagtgggtttcactgccgtatggcaattagcactagtcactctagcagttgtt
cctctcattgctgtgattgcagccatccacaccaacacattagccaaactatctggcaag
agccaagaagctttatcacaagctggaaacattgtggaacagacgatagttcaaattcgc
gttgttatggcgtttgttggggaatcaagagcattacaagggtattcatcagcgttgaga
gtagctcaaaggatcggttacaagagtgggtttgctaaaggaatgggattaggtgcaact
tattttgttgttttctgttgctatgctctgcttctctggtatggaggtttccttgttcgg
catcattataccaatggtggattagccatagctaccatgtttgccgtcatgattggaggg
ttggctttaggccaatctgctcctagcatgggtgcatttgccaaagcaaaagctgcggct
gcgaaaattttccgtattattgatcataaaccagctgtggatcgaaacagtgaatccggg
ttaaagttagattcagttactggactagttgaactaaagaatgttgatttctcctaccca
tcaaggccagatgttaagattctcaacaattttaccctcaatgtcccagccggaaagact
atagctttggttggcagcagtggctctggtaaaagtactgtggtatccctcattgaaaga
ttctatgatcccaactcagggcaagttttgctagatgggcatgatataaagacactcgat
ttaagatggttgagacaacaaatagggcttgttagccaagaacctgctctgtttgccact
accattaaagaaaatatattgttgggtaggcctgatgctgatcaaatcgagattgaagaa
gctgccagagttgccaatgctcattcatttattgcaaagctacctgaaggctttgacact
caggtaggtgagagagggctgcagttgtcgggaggacagaagcaaagaattgcaattgca
agggcaatgctgaaaaatccagcaattttgctgttagatgaggcaacaagtgcactggac
tctgagtcagaaaaactggtgcaggaggcccttgaccgattcatgattgggagaacgact
cttgtcattgcccaccggctgtccacgatccgcaaagctgatcttgtagctgtacttcaa
cagggtagtgtcactgaaattggaacccatgatgagctcattgctaaaggagacaatggt
gtttatgccaagctcataagaatgcaggagacggctcatgaaacagctatgaacaatgcc
agaaaaagcagtgcaagaccctcaagtgccaggaactcagtaagctctccaataattgca
cgtaattcttcttatggtcgctcaccatactcgcgccggttatccgacttctctacctca
gatttcagtctgtcccttgatgccacacaccccaattaccggcttgaaaagcttccattc
aaagagcaagctagttccttttggcgcctcgcaaagatgaactctcctgaatgggtttat
gcattggttggttctataggctcggtcgtgtgtggctcccttagtgccttctttgcctat
gtactaagtgctgtcctcagcgtctactacaatccaaatcatgcttacatgagcagagaa
attgcaaagtactgctatttgttaattgggctctcatcagctgctctaatcttcaacaca
ctacaacattccttctgggacattgttggagaaaaccttacaaaacgagtgagggaaaaa
atgctagcagcagtgctcaaaaatgaaatggcatggtttgatcaggaggaaaatgagagt
gctagaattgcaggaagattagctcttgatgcaaacaatgtgagatcagcaattggagac
aggatttcagtgattgtacagaatacagcactgatgctagttgcttgcacagcagggttc
gttttgcaatggcgccttgcccttgtccttatagccgtcttccccttggttgttgcagcc
actgttctacagaaaatgttcatgactggtttctctggggacctagaatctgcacatgcc
aaagccacacaacttgcaggcgaggccatagccaatgtaaggacagttgctgccttcaat
tcagagtctcaaatagttggtctattcgccaccaacctccaggctcctttacggcgttgc
ttttggaaaggtcagattgcaggaagtggatttggaattgctcagttttcactctatgct
tcctatgctcttggtctttggtatgcatcttggcttgtgaagcatgaaatctctgatttc
tcgaagacaatccgagttttcatggtccttatggtttcagccaatggtgcagcagaaaca
ttaacattggctcctgattttatcaagggtggtcgagccatgcgctcagtcttcgacttg
cttgaccgtaaaactgaaattgaacctgatgatgcggatgcaactgcagttcctgaccgt
cttcgtggagaagttgaactaaagcatgtagacttttcttaccccactcgccctgatgtc
cctattttccgtgatctaaatctccgtgcacgagctggaaaaactcttgctcttgtaggt
ccaagtggatgtggtaagagttcagtgattgcacttgtacagagattctatgagccatca
tctggaagggttatgattgacgggaaggacatcaggaaatacaatctcaagtccctgaga
aagcatattgctattgtccctcaggagccatgtctcttcgctactaccatatacgaaaac
attgcctacgggcatgagtccgcaactgaggcggaaatcattgaagctgctactttagcc
aatgcgcataaattcatttcaggattgccagatggatataagacatttgtaggggagagg
ggagttcaattatcaggtggacagaaacaaagaattgccatagctcgggctctagttaga
aaggcagaactgatgctacttgatgaggcaacaagtgcactagatgccgagtcggagagg
tctgtccaagaggctctagaccgtgcttgctcaggaaagacaacaattgtggttgcacac
agactatcaactataagaaacgcccatgtcatcgccgtcatcgacgacgggaaagtagca
gagcaaggatcacacacacatctactgaaaaattatcctgacgggtgctatgcccggatg
atacagttgcagaggttcacacatagccaagtcattggaatgacttcaggttcgagttcg
tcagctagaccgagagaagatgaagagagggaagcctaa
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