Ricinus communis (castor bean): 8286639
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Entry
8286639 CDS
T01087
Name
(RefSeq) ABC transporter B family member 9 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8286639
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcu02000
]
8286639
04147 Exosome [BR:
rcu04147
]
8286639
04090 CD molecules [BR:
rcu04090
]
8286639
Enzymes [BR:
rcu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8286639
Transporters [BR:
rcu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8286639
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8286639
CD molecules [BR:
rcu04090
]
Proteins
8286639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_29
RsgA_GTPase
AAA_22
AAA_16
AAA_15
Zeta_toxin
AAA_23
AAA_30
DUF87
DLIC
nSTAND1
nSTAND3
NB-ARC
MtrB
Motif
Other DBs
NCBI-GeneID:
8286639
NCBI-ProteinID:
XP_015582280
LinkDB
All DBs
Position
3:4290445..4297012
Genome browser
AA seq
1237 aa
AA seq
DB search
MKGNGEASVGEKRRDKKVAFYKLFTFADSLDWVLIVVGTVCATAHGLSDSLMILIFSKII
NSFGTAQKSDIIRQVSEIAVTMVYLAVGTGIASFLQASCWLTTGERQSVRIRGLYLKTIL
RQDIAFFDTELRTGEVIERLSSNSIHIRIAIAEKAGKLIQLVSAFIGGFTVAFVRGWHLA
LVLAFCVPVLAINFQILSIVMSKLVIRQQLARVEAGNVVEQTIGAIRMVASFTGEKHAIA
KYNEKLRIAYKASMLQGLAMGFFIGVLFFVLFVTYGLASWYGSILIIHKGYNGGQVICVI
MAITGAAMALGQVSSFLRSFTTGQVAAYRMFKIIERKSKIDSYSSRGMVLEDINGEIELK
DVYFRYPSRPDVEIFSGLSLHLPSSRTVALVGQSGSGKSTVISLIERFYDPDSGEILVDG
FSLNKLNISWLREKIGLVSQEPVLFATSIKENIAYGKENATDEEIRFAVALANAAEFIDK
MPQGLGTIVGQRGTQLSGGQKQRIAIARAIVKNPKILLLDEPTSALDAKSEHIIQDALVK
VMSNRTTLIVAHRLTTIRNADEILVLHRGKVVEKGTHEELIQNMEGAYSQLVRLQEVKEG
THSHAKDEATSETTLNEDKLLSSSGTPDIPETSVPRPDNLHEGLSSNKISEKPKKGSLKR
LAYLNKPELPVLLLGTIGAMLYGVVFPIFGLLTSKSIVLFYEPPRKMQNDSKIWAAFFLG
LGFITLVGIITENFFFGIAGGRLIERISSRSFQRVVHQEISWFDDPTNSSGAVSARLSIN
ATTIETVIGEALPLVIKASTTMITALLIAFTANWILAFVVVAVSPLLFLQGYANAKFMKG
FSRDAKVMYEQASQVAHEAIGNIRTVASFCAEEKVTNLYEKKCEAPKKQGVQDGVLKGSG
FGFSNFILHSTHAFCLYIGSILVHHGKASFEDVFRVFFALTVAINTVSGTNDLALNTTRA
MEAIASIFNIFDRKPKIDSSSDEGITPVHVDGNIDLHHVSFKYPTRPDVQILKDLSLKIP
AEKVVAIVGESGSGKSTIISLIQRFYDPDSGCMYFDGLDIKSLKLNWLRQQMGLVSQEPV
VFHESIRSNIAYGKQGDVNEEEIIEAARAANAHEFISSLPEGYSTSVGEQGVQLSGGQKQ
RIAIARAILRKPKVLLLDEATSALDAESEHAVQDALQKVMINRTTVVVSHRLSSIKNADI
IVVVKNGVIVEKGSHDALMKIPNGSYASLVTLYHNKD
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaaatggagaagcatcagtaggggaaaaaaggagggataaaaaagtggcattc
tacaagctgttcacttttgcagacagccttgactgggttttgatcgttgttggcacagta
tgtgccactgctcatggactttctgattctctaatgatactaattttcagcaagattatc
aactctttcggtacagctcagaaatctgatatcataagacaagtttcagagatagcagtg
acgatggtgtacttggcagtaggtacaggcattgcatcttttctgcaggcctcatgctgg
ctgaccactggagaaagacaatctgtgcgcattcggggcttgtacttgaagacaatctta
agacaggacattgctttctttgatactgaattaagaactggtgaggtcattgagagattg
tctagcaacagcattcacattcgaattgccattgctgagaaggctgggaagttaatacag
ctagtttctgcttttatcggtggctttacggttgcttttgtgagaggatggcaccttgca
ctagttttggccttctgcgttccggttctggcaattaattttcaaatcctgtcaatcgtc
atgtcaaaattggtaatccgacagcagctggctcgtgtagaagctggaaatgttgtagaa
caaaccattggagccattagaatggttgcgtccttcactggtgagaagcatgctattgca
aaatacaatgaaaagctgagaattgcttataaagctagtatgctacaaggtttggctatg
ggcttcttcattggtgtactgttttttgttctctttgtgacttatgggcttgcatcatgg
tatggttccatattgatcatacacaaaggttataatggtggacaagtgatctgtgttatt
atggcaatcactggtgctgcaatggcactcggtcaggtttcttcatttttgagaagtttc
acgacaggccaagttgcagcctacaggatgttcaaaatcattgaaagaaagtcgaaaatc
gattcgtacagcagtcgtgggatggtcttggaagacatcaatggtgaaattgaacttaaa
gatgtatatttcagatatccatctaggcctgacgttgagattttttctggactttcacta
catcttccaagcagcagaacagtagctttagtagggcaaagtggaagtgggaaatcaact
gtaattagtctgattgagaggttctacgatcctgattctggtgaaatacttgtggatggt
ttcagtttgaacaagctgaacataagttggctcagggaaaagattggcctggtaagtcaa
gaacctgttctctttgcaactagcataaaggagaacatagcatacggaaaagaaaatgca
actgatgaggaaattagatttgctgttgcgcttgctaatgctgctgaattcattgacaag
atgccacaggggcttggcacaatagtaggtcaacgtggtactcaattatcaggaggacag
aagcaaaggattgcaattgcaagggccatagtgaagaatccaaaaattctccttcttgat
gaacccaccagtgcactggatgcaaaatctgaacacattattcaggatgcacttgtcaaa
gttatgtctaaccgaacaactctgattgtagctcatcgtttgacgactatcaggaatgct
gatgagatactagttttgcacaggggtaaagttgtggaaaaaggcactcatgaagaatta
atacaaaacatggaaggagcttattcccaactagttcgcctccaagaagttaaggagggc
actcattcccatgccaaagatgaagctacttcagaaactactctcaatgaagataagctc
ctttcaagttctggcacacctgacattcctgaaacaagtgtgcctagaccggataacctc
catgagggtctgagcagtaataaaataagtgagaagcctaaaaaaggttctctcaaacgg
cttgcctacctgaataagccagagctgcctgttctcttgcttggaactattggtgcaatg
ttatatggggtagtttttcccatttttggcctgttaacctcaaaatctattgttctgttc
tatgaacctccaaggaagatgcaaaacgactctaagatttgggcagctttctttcttggc
ctgggattcattacccttgtgggtataataactgagaatttcttctttggaattgctggc
ggaagattgattgaacgaatttcttccaggtcatttcagagggttgtgcaccaagaaatt
agttggtttgatgatcctacaaattccagtggtgcagtaagtgcaagattgtcaatcaat
gctactacaattgaaactgtcattggtgaagccttacccttagtcataaaagcctcaacg
acaatgataacagcactacttatagcattcacagctaattggattctggcatttgtggta
gttgctgtatcccccttgctatttctccagggatatgctaatgccaagtttatgaaaggt
ttcagtagagatgcaaaggtaatgtatgaacaagcaagtcaagtggcacatgaagcaatt
ggcaacatcagaactgttgcatccttttgtgcagaggaaaaggtgacaaatttgtatgag
aagaaatgtgaagctcccaagaaacaaggtgttcaagatggagttttgaagggaagtggt
tttggcttttcaaactttatcctccacagcacacatgctttttgtctctacattggatct
attcttgtgcaccatggcaaggcatcatttgaggatgtcttcagggttttcttcgccttg
actgttgcaataaatacagtttctggaaccaatgatttggctctaaataccaccagagct
atggaggcaatagcatccatattcaacatttttgacagaaagccaaaaattgactcaagc
agtgatgaaggcataacaccagtgcatgtggatggaaatattgacttgcaccatgttagc
ttcaagtacccaacaagaccagatgttcagattcttaaagacttgtcccttaaaatccct
gcagagaaggttgttgccatagttggggaaagtgggagtgggaaatcaacaataatcagc
ctgatacaaagattttatgatcctgattctggttgcatgtactttgatggtttagatatc
aagagcttgaaattaaattggctcaggcaacaaatgggattagtcagccaagaaccagta
gtatttcatgaaagcattcgctcaaacatagcttatggcaaacaaggggatgtaaatgag
gaagagataattgaagcagcaagagcagcaaatgcccacgagtttattagctctttaccc
gaaggctacagtacttcagtgggtgaacaaggagtacaactgtctggtggacagaaacaa
agaattgccattgcaagggcaatactaaggaaaccaaaagttcttttgcttgatgaggcc
acaagtgcactggatgctgagtccgagcatgcagtgcaagatgcattgcagaaagttatg
atcaatagaaccactgttgttgtttcgcatcgcctttcatcaattaaaaatgctgatatt
attgtagtggtaaagaatggtgttattgttgaaaaaggaagccacgatgcattgatgaag
ataccaaatgggtcttatgcttcattagtcactctttatcacaacaaagattaa
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