Ricinus communis (castor bean): 8286646
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Entry
8286646 CDS
T01087
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00906
Carotenoid biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
8286646
Enzymes [BR:
rcu01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
8286646
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
HI0933_like
Thi4
Pyr_redox
Pyr_redox_3
NAD_binding_8
FAD_binding_2
FAD_binding_3
Trp_halogenase
GIDA
Motif
Other DBs
NCBI-GeneID:
8286646
NCBI-ProteinID:
XP_002531498
UniProt:
B9SZS9
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Position
10:20947791..20949981
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AA seq
514 aa
AA seq
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MDTLLRTHNKLEFLPQLHGFSEKVSIFEPKKEKISNSNFIEYQNSEVRFCSKKTYPKRCR
NGCVKASSGALLELVPETKKENLEFELPMYDSSKGGVVDLAVVGGGPAGLAVAQQVSEAG
LSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKSKKDLGRPYGRV
NRKQLKSKMLQKCISNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL
VQYDKPYNPGYQVAYGILAEVEDHPFDVDKMLFMDWRDSHLKNNPELQKRNSKIPTFLYA
MPFSSERIFLEETSLVARPGVRMEDIQERMVARLKHLGIKVKSIEEDEHCVIPMGGPLPV
LPQRVVGIGGTAGMVHPSTGYMVARTLAAAPVVANSIVQYLGSSRSLSGTELSAEVWKDL
WPIERRRQREFFCFGMDILLKLDLQATRRFFDAFFDLEPHYWHGFLSSRLFLPELIFFGL
SLFSHASNTSRLEIMAKGTLPLVNMVNNLIQDSE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggatactttattgagaacgcataataaacttgaattcttgcctcaacttcatggtttc
tcggaaaaagtcagtattttcgaaccaaaaaaagagaaaattagcaattcgaattttata
gagtatcagaactctgaggttaggttttgttccaagaaaacttatccaaaaaggtgcaga
aatggatgtgttaaggctagtagtggtgcccttttggagctagtacctgaaaccaagaag
gaaaatcttgaatttgagcttcctatgtatgactcatcaaaaggtggtgttgttgatctt
gctgttgtgggtggtggcccggcaggcctcgcagttgcccagcaagtttcagaggcaggc
ctttctgtttgttcaatcgacccatctcctaaattgatttggccaaataattatggtgtt
tgggtggatgaatttgaggccatggatttgcttgattgtcttgataccacctggtctggt
gctgttgtctacattgatgataaatcgaagaaggatcttggtaggccttatgggagggtt
aacaggaagcagctaaagtcgaaaatgctacaaaaatgtatatccaatggtgttaagttt
caccaagccaaagttatcaaggttattcatgaggaatcaaaatccctattgatttgtaat
gatggtgtcacaatccaggctgctgtggttcttgatgcaactggattttctagatgcctt
gttcagtatgataagccatacaatccaggttaccaagtggcttatggaatattggctgag
gtagaagatcacccatttgatgtagataaaatgctttttatggactggagagactcacat
ttgaaaaataatccggagctacaaaagagaaatagtaagatccccacttttctgtatgca
atgcccttttcatcagagaggatatttctcgaagaaacttccctagttgctcggcctggt
gtacgtatggaagatatccaggaaagaatggtagctaggttgaagcacttaggaataaaa
gtgaaaagtattgaagaagatgagcattgcgtcatcccaatgggtggccccctccccgtc
cttcctcaaagagttgttggcattggtggcacagctggcatggttcacccttcaactggg
tacatggtagcaagaactctagcggcagctccagttgttgccaattccatagtccagtac
cttggttccagtagaagtctttcaggaaccgaattgtcagcagaagtttggaaagattta
tggccaatagagaggaggagacaaagagagttcttctgttttggcatggacattttgctc
aagcttgatttacaagccacacgaaggttcttcgatgcattttttgatcttgaaccccat
tattggcacggtttcttgtcatctcgtctatttctccccgagcttatattttttgggctg
tcattgttttcccatgcttctaatacttccaggttagagattatggcaaagggaacgctt
cctttggttaacatggtcaacaatttaatacaagatagtgaatag
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