Ricinus communis (castor bean): 8288580
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Entry
8288580 CDS
T01087
Name
(RefSeq) beta-galactosidase 17
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00052
Galactose metabolism
rcu00511
Other glycan degradation
rcu00531
Glycosaminoglycan degradation
rcu00600
Sphingolipid metabolism
rcu00604
Glycosphingolipid biosynthesis - ganglio series
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
8288580
09103 Lipid metabolism
00600 Sphingolipid metabolism
8288580
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
8288580
00604 Glycosphingolipid biosynthesis - ganglio series
8288580
00511 Other glycan degradation
8288580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8288580
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
8288580
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8288580
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_gal-bd
BetaGal_ABD_1
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
8288580
NCBI-ProteinID:
XP_048234475
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All DBs
Position
8:7691782..7699054
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AA seq
704 aa
AA seq
DB search
MIRAKRNDTNPVTMVTKKRSHPKTTLFLAVIICLLALAVLVPVVFAPLPSLSHSHSHRHR
KVNARRSFEINDDMFWRDGKPFRIIGGDLHYFRILPQYWEDRLLRAKALGLNTVQTYVPW
NLHEPQPGRLVFEGIADLVSFLQLCQKLDLLVMLRPGPYICAEWDLGGFPAWLLAIEPPL
KLRSSDPAYLKSVDRWWGVLLPKVTPLLYSNGGPIIMVQIENEFGSYGDDKAYLHHLIKL
AREHLGERIILYTTDGGSRETLEKGTIRGDTVFSAVDFATGDDPWPIFNLQKKFNAPGKS
PPLSAEFYTGWLTHWGEKIAQTDAEFTASSLEKILSRNGSAVLYMAHGGTNFGFYNGANT
GADESDYKPDLTSYDYDAPISESGDVDNAKFNALRRVIGVHSAASLPSVPPNNDKTGYGP
IQLHKTTFLFDLLDTINPADVVESKNPVSMESAGQMFGFLVYVTRYAPKVDGSTLYIPEV
HDRGQVFTLCPSDGSSGRPVYAGAIERWSNQKVLLPNSKCASNISLFVLVENMGRVNYGR
YMFDRKGILSSVYLDGRILNGWRMISLPLHNLNEVPKINPIIQAVHSTLSTRTKLEDYPR
SFSIEPAFYTGYFFIEKEDQVKDTFISFSGWGKGIAFVNDFNLGRYWPSFGPQCNLYVPS
PVLRHGKNVLVILELESPHSELVIHSVSQPDFKCGSSRLNVHQL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagccaaaagaaacgacactaatccagtaacaatggtgacgaaaaagagatca
catcctaaaacgactctgttcttagcagtcataatttgcttgctagctttagcagtgttg
gttccagtggtcttcgctcctctcccttctctatctcactctcactctcatcgtcacaga
aaggtaaatgccagaagaagctttgagattaatgatgatatgttttggagagatggtaag
ccatttaggataatcggtggtgacttgcactattttcgaattcttcctcagtactgggaa
gataggttattgagagcaaaggctctgggcttgaatacagttcaaacttatgttccttgg
aatctacatgaaccgcaacctggcaggttggtttttgaaggtattgccgacctagtttca
tttctccaactctgtcagaagctggatttgcttgttatgcttcgacctggcccttatata
tgtgcagagtgggatttaggcggtttccctgcttggttactagctatagaaccacctctc
aaactcagatcatctgatcccgcttatcttaagtcggttgacagatggtggggagtccta
ctaccaaaggtcactcctctgctttatagcaatgggggtcctattataatggttcagatt
gaaaatgaatttgggtcatatggagatgacaaagcttatcttcatcacctgatcaaattg
gccagggaacatcttggggagaggataattttatataccacagatggaggttctagggaa
actcttgagaaaggaacaattcgtggagatactgtcttttcagctgttgatttcgctacc
ggtgatgatccttggcctatattcaatttacaaaagaagttcaatgccccagggaaatca
ccaccactttccgcggagttctatactggttggctgacacactggggagagaagattgca
cagacagatgctgaatttacagcatcttccttggaaaagattttatcacgaaatggttct
gctgtgctttatatggcacatggtggaacaaactttggattttacaatggggcaaatact
ggtgcagacgagtctgattacaagccagatctcacttcctatgattatgatgcaccaatt
agcgaatctggtgatgtggataatgcaaaatttaatgcactgcggagggttataggggtt
catagtgcagcatctcttccctcagttccgcccaataatgacaagacaggatatggacct
attcaactacataaaacaacatttttgtttgatttacttgatacgataaatcctgctgat
gtggttgaatccaaaaacccagtctcaatggaatctgcgggacagatgtttggatttcta
gtatatgttactcgatatgctccaaaggttgatgggagtactctatatataccagaggtg
catgatagaggtcaggtgtttacattgtgcccttctgatggtagcagtggaaggccagtg
tatgctggtgcaattgaaaggtggtcgaatcaaaaagttctccttcctaattccaaatgt
gcttccaacatcagcttatttgttttggtcgagaacatgggccgtgtaaattatgggcgg
tacatgtttgataggaagggaattttgtcatctgtttatctggacggtagaattttgaat
gggtggagaatgatttcacttcctcttcacaatctgaacgaggtgccaaaaatcaatccc
atcattcaagctgtacattcaacattatcaactcgcacaaaattagaagattacccaagg
agtttttccatagaaccagcattctatacagggtatttttttattgagaaagaagaccaa
gttaaagatacattcatatcattcagcggttggggtaaagggatagcttttgtaaatgat
tttaacttaggaagatattggccgtcgtttggaccacaatgcaacctttatgtcccttct
ccagtcctcaggcatgggaaaaatgttctggttattctggagttagaatctcctcattca
gagcttgtgatacattcagtgagccagccagacttcaagtgtggttcaagtagattgaat
gtgcatcagctctag
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