Roseobacter denitrificans: RD1_0043
Help
Entry
RD1_0043 CDS
T00376
Symbol
ribA
Name
(GenBank) GTP cyclohydrolase II
KO
K01497
GTP cyclohydrolase II [EC:
3.5.4.25
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00740
Riboflavin metabolism
rde00790
Folate biosynthesis
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01240
Biosynthesis of cofactors
rde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
RD1_0043 (ribA)
00790 Folate biosynthesis
RD1_0043 (ribA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD1_0043 (ribA)
Enzymes [BR:
rde01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
RD1_0043 (ribA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
ABG29782
RoseoBase:
RD1_0043
UniProt:
Q16E11
LinkDB
All DBs
Position
42577..43665
Genome browser
AA seq
362 aa
AA seq
DB search
MSFSPDQNELIARARADLRMGVPVVIDGATPLLAAPVETLNAARLGDVMALSQDAVLVIT
ARRAATLKAAAYDGDLARVKLSPDATLAWVNGVADPAGDLMNPMKGPLACARGGDAETHR
FAIQLAKAARLLPAVVCAPVDNAPAFAQAHNLVCLAAQSGQAMLDASSPLHAVISARLPM
EVSEAGRLHVFRPEDGGEEHYAIEIGRPDRAAPLLTRLHSACFTGDLMGSLKCDCGPQLR
AALAQMGAEGNGVLLYMNQEGRGIGLANKMRAYSLQDQGFDTVEANHRLGFEDDERDFRL
GAAILKSMGFSKARLLTNNPRKVAMMCENGIDVTERVPLHVGENAHNHAYLATKVAKSGH
LK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctcacccgaccaaaatgaattgatagcccgcgcgcgcgcggacctgcggatg
ggcgtacccgtcgtgattgacggcgcgacgccactgcttgcagccccggtggaaacgctc
aatgccgcgcggctgggtgatgtgatggccctgtcgcaagatgcggttctggtcattacc
gcacgccgcgccgcgacgctcaaggcggccgcctatgatggcgatctggcccgggtgaaa
ctgtcccccgatgcgacactggcctgggtgaacggggtcgcggacccggcgggtgatctg
atgaacccgatgaaagggcctctggcctgcgcgcgcggtggggacgccgaaacgcaccgc
tttgccattcaactggcgaaagccgcgcgcttgttgccagcggttgtctgcgccccggtg
gacaatgcgccggcctttgcgcaggcgcataacctcgtgtgtctcgcggcgcaaagcgga
caggcgatgctggatgcctcaagccccttgcacgcggtgatcagcgcgcgcctgccgatg
gaggtatcagaggccgggcgattgcatgtgttccggcccgaagacggcggtgaagagcat
tacgccattgaaatcggcaggccggatcgcgccgccccgctgctgacaaggctgcattcc
gcctgtttcaccggggatctgatgggatcgctcaaatgcgactgcggtccacagttgcgc
gccgccctcgcgcagatgggagcggaggggaacggcgtgcttctgtatatgaaccaggaa
gggcgcggcattggtctggccaataaaatgcgggcatattccttgcaggatcaagggttt
gacacggtcgaagccaaccaccggctcgggtttgaggatgacgaacgcgactttcgcctc
ggcgccgcaatcctgaaatccatggggttttccaaggcgcggctgctgacgaacaacccg
cgcaaggtcgccatgatgtgcgaaaacggcatcgacgtgaccgaacgtgtgccgcttcat
gtgggcgagaacgcgcataatcacgcctatctcgcgacgaaagtcgccaaatcgggccat
ctgaaatga
DBGET
integrated database retrieval system
