Roseobacter denitrificans: RD1_1162
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Entry
RD1_1162 CDS
T00376
Symbol
mtkA
Name
(GenBank) malate-CoA ligase, beta subunit, putative
KO
K14067
malate-CoA ligase subunit beta [EC:
6.2.1.9
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00630
Glyoxylate and dicarboxylate metabolism
rde00680
Methane metabolism
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RD1_1162 (mtkA)
09102 Energy metabolism
00680 Methane metabolism
RD1_1162 (mtkA)
Enzymes [BR:
rde01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.9 malate---CoA ligase
RD1_1162 (mtkA)
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Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
Ligase_CoA_2
ATP-grasp
Succ_CoA_lig
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ABG30813
RoseoBase:
RD1_1162
UniProt:
Q16B30
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Position
1122758..1123957
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AA seq
399 aa
AA seq
DB search
MDIHEYQAKEVLANFGVAVPDGALAYSPEQASYRARELGGERWVVKAQIHAGGRGKAGGV
KVCESDVEIQKASEEMFGKKMITHQTGPEGKGIYRVYVEAAVPIDREIYLGFVLDRTTQR
VMIVASAEGGMEIEEISEKRPESIVRAIVEPAVGLREFQCRQIAFKLGVDAGLTQQMVRT
LQGCYRAFTELDATMVEINPLVITADNRVIALDAKMTFDDNALFRHPQISELRDKSQEDP
RESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIGGGATPERVAK
AFRLVLSDKSVQAILVNIFAGINRCDWVAEGVVQALREVQVDVPVIVRLAGTNVEEGQKI
LAQSGLPIIRATTLMEAAERAVGAWQNDLSQGTRMRAVS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggatatccacgagtaccaagcgaaagaagttcttgctaatttcggggtcgctgtgccg
gatggcgctttggcgtacagcccggaacaggcatcctaccgcgcacgcgagctcggcggt
gaaagatgggttgttaaggcccagatacacgccggcgggcgcggcaaggcgggcggcgta
aaagtctgtgaaagcgacgtcgaaatccagaaagcatccgaagagatgtttggcaaaaag
atgatcacgcatcagaccggaccagaaggcaaaggcatctaccgcgtctatgtcgaggct
gcggtgccgatagatcgcgagatttatctgggctttgttcttgatcgtacgacgcaacgg
gtcatgatcgttgcaagtgccgaaggcggtatggagattgaagaaatctctgaaaaacgc
cccgaaagcatcgttcgggcgattgtggagcctgccgttggtctgcgcgaatttcagtgc
cgccagattgcattcaaattgggcgtcgatgcgggtctgacacagcagatggtgcgtacc
ttgcaaggctgttatcgggcttttaccgagctggacgcgaccatggtggagatcaaccct
ttggtcattaccgcagacaatcgcgtgattgcgctggatgccaagatgacttttgacgac
aatgcgttgttccgccacccacagatcagcgaattgcgcgacaaatcgcaagaggatccg
cgcgaaagccgggctgccgatcgcggtctgtcctatgtcggtctggacggcaatatcggc
tgcatcgtgaacggggctggccttgccatggcgacgatggacacgatcaaactggccggt
ggggagcctgcgaatttcctcgatatcggcggtggggccacgcccgaacgtgtggccaag
gctttccggctggtgctgtcggacaagagcgtgcaggcgatcttggtcaatatctttgca
gggatcaaccgctgtgactgggtggccgaaggcgtcgtgcaggccctcagggaagtgcag
gtcgatgtgcccgtgatcgtgcgactggccggcaccaatgtggaggaagggcagaagatt
ctcgcccaatccggcctgccgatcatccgcgcaaccactctgatggaagccgccgagcgc
gcggtcggtgcgtggcagaatgacctgtcgcagggtacaagaatgagggccgtatcatga
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